RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 FOXD4L4Q8WXT5 416 aaPredicted RBP7.11□□□□□ -1.27
FCF1-208ENST00000556814 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
FCF1-208ENST00000556814 FAM8A1Q9UBU6 413 aa7.11□□□□□ -1.27
FCF1-208ENST00000556814 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
FCF1-208ENST00000556814 SORBS3O60504 671 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 RAC1P63000 192 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 TAGLNQ01995 201 aaKnown RBP7.1□□□□□ -1.27
FCF1-208ENST00000556814 DTHD1Q6ZMT9 781 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 DMRTC2Q8IXT2 367 aaPredicted RBP7.1□□□□□ -1.27
FCF1-208ENST00000556814 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 OSBPL7Q9BZF2 842 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 ABCB6Q9NP58 842 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
FCF1-208ENST00000556814 H3BRJ5 948 aa7.09□□□□□ -1.27
FCF1-208ENST00000556814 ITPKAP23677 461 aa7.09□□□□□ -1.27
FCF1-208ENST00000556814 GRIA4P48058 902 aa7.09□□□□□ -1.27
FCF1-208ENST00000556814 FCGRTP55899 365 aa7.09□□□□□ -1.27
FCF1-208ENST00000556814 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
FCF1-208ENST00000556814 WNT8BQ93098 351 aa7.09□□□□□ -1.27
FCF1-208ENST00000556814 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
FCF1-208ENST00000556814 SH2B1Q9NRF2 756 aaPredicted RBP7.09□□□□□ -1.27
FCF1-208ENST00000556814 METTL12A8MUP2 240 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 EPHA1P21709 976 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 ARL4DP49703 201 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 GP2P55259 537 aaKnown RBP7.08□□□□□ -1.28
FCF1-208ENST00000556814 IKBKEQ14164 716 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 SPRED3Q2MJR0 410 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 ILDR2Q71H61 639 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 DDX54Q8TDD1 881 aaKnown RBP7.08□□□□□ -1.28
FCF1-208ENST00000556814 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
FCF1-208ENST00000556814 NOS3P29474 1203 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 IREB2P48200 963 aaKnown RBP7.07□□□□□ -1.28
FCF1-208ENST00000556814 PIP4K2BP78356 416 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 KLHL23Q8NBE8 558 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 OSGEPQ9NPF4 335 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 VTI1BQ9UEU0 232 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 USP21Q9UK80 565 aa7.07□□□□□ -1.28
FCF1-208ENST00000556814 LINC01387J3KSC0 135 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 PCDH1Q08174 1060 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 FAM161BQ96MY7 647 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 CEP44Q9C0F1 390 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 SOX17Q9H6I2 414 aaPredicted RBP7.06□□□□□ -1.28
FCF1-208ENST00000556814 AKAP2Q9Y2D5 859 aa7.06□□□□□ -1.28
FCF1-208ENST00000556814 FSCN2O14926 492 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 ESRRAP11474 423 aaPredicted RBP7.05□□□□□ -1.28
FCF1-208ENST00000556814 CDC25BP30305 580 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 ADAMTSL4Q6UY14 1074 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 PRR23CQ6ZRP0 262 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 FMR1NBQ8N0W7 255 aaPredicted RBP7.05□□□□□ -1.28
FCF1-208ENST00000556814 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 CRELD1Q96HD1 420 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 RNF19AQ9NV58 838 aa7.05□□□□□ -1.28
FCF1-208ENST00000556814 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 C19orf57Q0VDD7 668 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 MRPL58Q14197 206 aaKnown RBP7.04□□□□□ -1.28
FCF1-208ENST00000556814 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 KRTAP5-3Q6L8H2 238 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 TXNDC11Q6PKC3 985 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 SLC7A3Q8WY07 619 aa7.04□□□□□ -1.28
FCF1-208ENST00000556814 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
FCF1-208ENST00000556814 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
FCF1-208ENST00000556814 B3GALT4O96024 378 aa7.03□□□□□ -1.28
FCF1-208ENST00000556814 FSTP19883 344 aa7.03□□□□□ -1.28
FCF1-208ENST00000556814 VAMP1P23763 118 aa7.03□□□□□ -1.28
FCF1-208ENST00000556814 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
FCF1-208ENST00000556814 DEAF1O75398 565 aaPredicted RBP7.02□□□□□ -1.29
FCF1-208ENST00000556814 ST13P50502 369 aaKnown RBP7.02□□□□□ -1.29
FCF1-208ENST00000556814 TAF1CQ15572 869 aaPredicted RBP7.02□□□□□ -1.29
FCF1-208ENST00000556814 ZNF423Q2M1K9 1284 aa7.02□□□□□ -1.29
FCF1-208ENST00000556814 MRRFQ96E11 262 aaKnown RBP7.02□□□□□ -1.29
FCF1-208ENST00000556814 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
FCF1-208ENST00000556814 GPN3Q9UHW5 284 aaPredicted RBP7.02□□□□□ -1.29
FCF1-208ENST00000556814 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
FCF1-208ENST00000556814 DLL1O00548 723 aa7.01□□□□□ -1.29
FCF1-208ENST00000556814 CD68P34810 354 aaPredicted RBP7.01□□□□□ -1.29
FCF1-208ENST00000556814 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
FCF1-208ENST00000556814 SAMM50Q9Y512 469 aa7.01□□□□□ -1.29
FCF1-208ENST00000556814 TGFB1P01137 390 aa7□□□□□ -1.29
FCF1-208ENST00000556814 CYP11A1P05108 521 aa7□□□□□ -1.29
FCF1-208ENST00000556814 CTSHP09668 335 aa7□□□□□ -1.29
FCF1-208ENST00000556814 RBM25P49756 843 aaKnown RBP7□□□□□ -1.29
FCF1-208ENST00000556814 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
FCF1-208ENST00000556814 GSTM4Q03013 218 aa7□□□□□ -1.29
FCF1-208ENST00000556814 FAAP100Q0VG06 881 aa7□□□□□ -1.29
FCF1-208ENST00000556814 AP3B2Q13367 1082 aa7□□□□□ -1.29
FCF1-208ENST00000556814 TPTE2Q6XPS3 522 aa7□□□□□ -1.29
FCF1-208ENST00000556814 SV2BQ7L1I2 683 aa7□□□□□ -1.29
FCF1-208ENST00000556814 GALNT11Q8NCW6 608 aa7□□□□□ -1.29
FCF1-208ENST00000556814 KLHDC7BQ96G42 594 aa7□□□□□ -1.29
FCF1-208ENST00000556814 CARD10Q9BWT7 1032 aa7□□□□□ -1.29
FCF1-208ENST00000556814 KIAA1324LA8MWY0 1029 aaPredicted RBP6.99□□□□□ -1.29
FCF1-208ENST00000556814 RLBP1P12271 317 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms