RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-205ENST00000556607 TEKT1Q969V4 418 aa13.18□□□□□ -0.3
SPTLC2-205ENST00000556607 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
SPTLC2-205ENST00000556607 GRIK5Q16478 980 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 LPIN2Q92539 896 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 MEIS3Q99687 375 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
SPTLC2-205ENST00000556607 MAST3O60307 1309 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 FGFR2P21802 821 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 TM4SF4P48230 202 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
SPTLC2-205ENST00000556607 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 MANSC4A6NHS7 340 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 USP2O75604 605 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 GNAI3P08754 354 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 CACNB3P54284 484 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 DIEXFQ68CQ4 756 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 MIER1Q8N108 512 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 ARHGAP45Q92619 1136 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
SPTLC2-205ENST00000556607 BCAR3O75815 825 aa13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 CIAO1O76071 339 aa13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 IL15P40933 162 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 INHBEP58166 350 aa13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
SPTLC2-205ENST00000556607 GPR25O00155 361 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 ALDH1A1P00352 501 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 ZDHHC15Q96MV8 337 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 CSADQ9Y600 493 aa13.13□□□□□ -0.31
SPTLC2-205ENST00000556607 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 MLLT1Q03111 559 aaPredicted RBP13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
SPTLC2-205ENST00000556607 FKTNO75072 461 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 TRIM27P14373 513 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 PHKA1P46020 1223 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 TIMM10P62072 90 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 HHIPL2Q6UWX4 724 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 MRIQ9BWK5 157 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
SPTLC2-205ENST00000556607 MYH2Q9UKX2 1941 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 GNAI2P04899 355 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 PRDX5P30044 214 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 ADORA1P30542 326 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 TFCP2Q12800 502 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
SPTLC2-205ENST00000556607 LAMB1P07942 1786 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 SEMA3EO15041 775 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 GJA5P36382 358 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 SOX10P56693 466 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 TCP10Q12799 353 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 VGLL4Q14135 290 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
SPTLC2-205ENST00000556607 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms