RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 ZNF34Q8IZ26 560 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 SYNE4Q8N205 404 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 RGS22Q8NE09 1264 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 BICD2Q8TD16 824 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 ARHGEF1Q92888 912 aaKnown RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 ZNF396Q96N95 335 aaPredicted RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 CCDC85AQ96PX6 553 aaPredicted RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 CDCA7Q9BWT1 371 aaPredicted RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 TNMDQ9H2S6 317 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 NCOA5Q9HCD5 579 aaKnown RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 CNNM1Q9NRU3 951 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 RCOR1Q9UKL0 485 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 BCL9LQ86UU0 1499 aa6.33□□□□□ -1.4
GPHN-213ENST00000556501 MYH14Q7Z406 1995 aaKnown RBP6.33□□□□□ -1.4
GPHN-213ENST00000556501 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 MAST2Q6P0Q8 1798 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 GOLGA8BA8MQT2 603 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 AP5Z1O43299 807 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 CAVIN2O95810 425 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 FGAP02671 866 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 TPM3P06753 285 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 FDPSP14324 419 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 PDE6AP16499 860 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 FGFR2P21802 821 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 CCT2P78371 535 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 UBE3CQ15386 1083 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 PUM3Q15397 648 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 ILDR1Q86SU0 546 aaPredicted RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 TDRD7Q8NHU6 1098 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 NCOA7Q8NI08 942 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 PIBF1Q8WXW3 757 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 LPIN2Q92539 896 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 NBPF3Q9H094 633 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 PUS7LQ9H0K6 701 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 PIH1D3Q9NQM4 214 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 CCDC87Q9NVE4 849 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 TRMT112Q9UI30 125 aaKnown RBP6.32□□□□□ -1.4
GPHN-213ENST00000556501 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 COL24A1Q17RW2 1714 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 LTBP4Q8N2S1 1624 aa6.32□□□□□ -1.4
GPHN-213ENST00000556501 NID2Q14112 1375 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 KAT6BQ8WYB5 2073 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 COL4A1P02462 1669 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 KLF18A0A0U1RQI7 1052 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 TCRBV5S4A2TA0A5A2 114 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 EXOC5O00471 708 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CTAGE5O15320 804 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 NR1I2O75469 434 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 PDE8BO95263 885 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 SLC5A1P13866 664 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 PHKA1P46020 1223 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 FOSBP53539 338 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 EIF5P55010 431 aaKnown RBP6.31□□□□□ -1.4
GPHN-213ENST00000556501 HAND2P61296 217 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 FAM160A1Q05DH4 1040 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 ALX1Q15699 326 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CAMK4Q16566 473 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 ANO6Q4KMQ2 910 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 PARP10Q53GL7 1025 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CCDC73Q6ZRK6 1079 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CHST3Q7LGC8 479 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 TBC1D10CQ8IV04 446 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 USP28Q96RU2 1077 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 GOLPH3LQ9H4A5 285 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 CBX8Q9HC52 389 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 GPHNQ9NQX3 736 aaPredicted RBP6.31□□□□□ -1.4
GPHN-213ENST00000556501 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 RTEL1Q9NZ71 1219 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 NAP1L2Q9ULW6 460 aaPredicted RBP6.31□□□□□ -1.4
GPHN-213ENST00000556501 TBC1D2BQ9UPU7 963 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 LAMB1P07942 1786 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 DLEC1Q9Y238 1755 aa6.31□□□□□ -1.4
GPHN-213ENST00000556501 SPATA31A1Q5TZJ5 1347 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 ZNF532Q9HCE3 1301 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 A0A1W2PQ27 194 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 A0A1W2PQ64 194 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 A0A1W2PQD8 194 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 GOLGA6L6A8MZA4 724 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 SH2B2O14492 632 aaPredicted RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 ZNF213O14771 459 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 IDH1O75874 414 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 CAMTA2O94983 1202 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 YEATS4O95619 227 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 CDC25BP30305 580 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 STX1AQ16623 288 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 SLC9C2Q5TAH2 1124 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 INTS5Q6P9B9 1019 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 SASS6Q6UVJ0 657 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 LUZP1Q86V48 1076 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 CCAR1Q8IX12 1150 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 ENGASEQ8NFI3 743 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms