RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FAM205AQ6ZU69 1335 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
SRP54-210ENST00000556380 BCAMP50895 628 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 GTF2IP78347 998 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 FSTL1Q12841 308 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■□□□□ 10.7
SRP54-210ENST00000556380 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 USP50Q70EL3 339 aaPredicted RBP11.96□□□□□ -0.49
SRP54-210ENST00000556380 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.49
SRP54-210ENST00000556380 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
SRP54-210ENST00000556380 CERS5Q8N5B7 392 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.49
SRP54-210ENST00000556380 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
SRP54-210ENST00000556380 EGFRP00533 1210 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
SRP54-210ENST00000556380 SLC5A1P13866 664 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 ADORA1P30542 326 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 TIMM10P62072 90 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 FKBP1AP62942 108 aaKnown RBP11.95□□□□□ -0.5
SRP54-210ENST00000556380 SMC1BQ8NDV3 1235 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 TRPM4Q8TD43 1214 aa11.95□□□□□ -0.5
SRP54-210ENST00000556380 H7C1D1 291 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 EAPPQ56P03 285 aaPredicted RBP11.94□□□□□ -0.5
SRP54-210ENST00000556380 CAVIN4Q5BKX8 364 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 SAMD7Q7Z3H4 446 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 ADAMTSL1Q8N6G6 1762 aa11.94□□□□□ -0.5
SRP54-210ENST00000556380 ZNF646O15015 1829 aaPredicted RBP11.93□□□□□ -0.5
SRP54-210ENST00000556380 PSME4Q14997 1843 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 MYO3BQ8WXR4 1341 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
SRP54-210ENST00000556380 MMP14P50281 582 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
SRP54-210ENST00000556380 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 IQSEC3Q9UPP2 1182 aaPredicted RBP11.93□□□□□ -0.5
SRP54-210ENST00000556380 JAG2Q9Y219 1238 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 CEP350Q5VT06 3117 aa11.93□□□□□ -0.5
SRP54-210ENST00000556380 PPP1R37O75864 691 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 PHKA1P46020 1223 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 TBC1D10BQ4KMP7 808 aaPredicted RBP11.92□□□□□ -0.5
SRP54-210ENST00000556380 CCDC102BQ68D86 513 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 VPS37DQ86XT2 251 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 ZBED3Q96IU2 234 aaPredicted RBP11.92□□□□□ -0.5
SRP54-210ENST00000556380 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
SRP54-210ENST00000556380 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
SRP54-210ENST00000556380 HMMRO75330 724 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 GRIK5Q16478 980 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 TNNI3KQ59H18 835 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
SRP54-210ENST00000556380 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 KIAA0825Q8IV33 1275 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 FPGT-TNNI3KV9GXZ4 949 aa11.91□□□□□ -0.5
SRP54-210ENST00000556380 PASKQ96RG2 1323 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
SRP54-210ENST00000556380 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 SEMA3EO15041 775 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 HSPA6P17066 643 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 OS9Q13438 667 aaPredicted RBP11.9□□□□□ -0.5
SRP54-210ENST00000556380 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 MFSD14BQ5SR56 506 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
SRP54-210ENST00000556380 MTMR14Q8NCE2 650 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 EAF2Q96CJ1 260 aaPredicted RBP11.9□□□□□ -0.5
SRP54-210ENST00000556380 NEUROD6Q96NK8 337 aa11.9□□□□□ -0.5
SRP54-210ENST00000556380 ASTN2O75129 1339 aaPredicted RBP11.89□□□□□ -0.51
SRP54-210ENST00000556380 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
SRP54-210ENST00000556380 RASGRF1Q13972 1273 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 SCARF1Q14162 830 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 ERC1Q8IUD2 1116 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 OGFOD1Q8N543 542 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 RHPN1Q8TCX5 695 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 TBC1D22AQ8WUA7 517 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 DCTPP1Q9H773 170 aa11.89□□□□□ -0.51
SRP54-210ENST00000556380 GNL3LQ9NVN8 582 aaKnown RBP11.89□□□□□ -0.51
SRP54-210ENST00000556380 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
SRP54-210ENST00000556380 WNT10BO00744 389 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 FRAT2O75474 233 aaPredicted RBP11.88□□□□□ -0.51
SRP54-210ENST00000556380 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 DBNLQ9UJU6 430 aaKnown RBP11.88□□□□□ -0.51
SRP54-210ENST00000556380 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
SRP54-210ENST00000556380 DENND2AQ9ULE3 1009 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms