RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ARAP2Q8WZ64 1704 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 TEKT1Q969V4 418 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 GBA2Q9HCG7 927 aaPredicted RBP18.7■□□□□ 0.58
ACTN1-217ENST00000556203 SALL1Q9NSC2 1324 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 PRDX5P30044 214 aa18.69■□□□□ 0.58
ACTN1-217ENST00000556203 HDLBPQ00341 1268 aaKnown RBP18.69■□□□□ 0.58
ACTN1-217ENST00000556203 PAXIP1Q6ZW49 1069 aaPredicted RBP18.69■□□□□ 0.58
ACTN1-217ENST00000556203 JMYQ8N9B5 988 aa18.69■□□□□ 0.58
ACTN1-217ENST00000556203 VEZTQ9HBM0 779 aa18.69■□□□□ 0.58
ACTN1-217ENST00000556203 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
ACTN1-217ENST00000556203 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
ACTN1-217ENST00000556203 VEGFBP49765 207 aa18.68■□□□□ 0.58
ACTN1-217ENST00000556203 SPDYE2Q495Y8 402 aa18.68■□□□□ 0.58
ACTN1-217ENST00000556203 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
ACTN1-217ENST00000556203 C2orf69Q8N8R5 385 aa18.68■□□□□ 0.58
ACTN1-217ENST00000556203 EAF2Q96CJ1 260 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-217ENST00000556203 MRIQ9BWK5 157 aa18.68■□□□□ 0.58
ACTN1-217ENST00000556203 TDRD3Q9H7E2 651 aaKnown RBP18.68■□□□□ 0.58
ACTN1-217ENST00000556203 ZNF70Q9UC06 446 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-217ENST00000556203 APBB1O00213 710 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 ARID4AP29374 1257 aaPredicted RBP18.67■□□□□ 0.58
ACTN1-217ENST00000556203 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 SPATA5Q8NB90 893 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 ZDHHC15Q96MV8 337 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
ACTN1-217ENST00000556203 DEFB129Q9H1M3 183 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
ACTN1-217ENST00000556203 HMG20BQ9P0W2 317 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
ACTN1-217ENST00000556203 TRPM7Q96QT4 1865 aa18.67■□□□□ 0.58
ACTN1-217ENST00000556203 HUNKP57058 714 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 GRM1Q13255 1194 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 TTC39AQ5SRH9 613 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 CYP4F22Q6NT55 531 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 HHIPL2Q6UWX4 724 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 PI16Q6UXB8 463 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 AACSQ86V21 672 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 ABCF2Q9UG63 623 aa18.66■□□□□ 0.58
ACTN1-217ENST00000556203 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
ACTN1-217ENST00000556203 MCAMP43121 646 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
ACTN1-217ENST00000556203 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 HHIPL1Q96JK4 782 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 CAPNS2Q96L46 248 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 CRBNQ96SW2 442 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 PPP2R3BQ9Y5P8 575 aa18.65■□□□□ 0.58
ACTN1-217ENST00000556203 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
ACTN1-217ENST00000556203 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
ACTN1-217ENST00000556203 NF2P35240 595 aa18.64■□□□□ 0.57
ACTN1-217ENST00000556203 ECE1P42892 770 aa18.64■□□□□ 0.57
ACTN1-217ENST00000556203 SPTY2D1Q68D10 685 aaPredicted RBP18.64■□□□□ 0.57
ACTN1-217ENST00000556203 DZIP1Q86YF9 867 aaKnown RBP18.64■□□□□ 0.57
ACTN1-217ENST00000556203 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
ACTN1-217ENST00000556203 TCP10L2B9ZVM9 353 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 FKBP1BP68106 108 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 TNFAIP1Q13829 316 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 TTLL12Q14166 644 aaPredicted RBP18.63■□□□□ 0.57
ACTN1-217ENST00000556203 RASA3Q14644 834 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 MOB2Q70IA6 237 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
ACTN1-217ENST00000556203 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
ACTN1-217ENST00000556203 CACNB3P54284 484 aa18.62■□□□□ 0.57
ACTN1-217ENST00000556203 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
ACTN1-217ENST00000556203 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
ACTN1-217ENST00000556203 TMOD2Q9NZR1 351 aa18.62■□□□□ 0.57
ACTN1-217ENST00000556203 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
ACTN1-217ENST00000556203 PRKG1Q13976 671 aa18.61■□□□□ 0.57
ACTN1-217ENST00000556203 RGMBQ6NW40 437 aa18.61■□□□□ 0.57
ACTN1-217ENST00000556203 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
ACTN1-217ENST00000556203 UBE2Q2LH0YL09 131 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 TNNI2P48788 182 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 MECOMQ03112 1051 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 SUPT20HL1Q3ZLR7 823 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 CDC42EP5Q6NZY7 148 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 SLF2Q8IX21 1173 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 RAI14Q9P0K7 980 aa18.6■□□□□ 0.57
ACTN1-217ENST00000556203 GAKO14976 1311 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 AOC2O75106 756 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
ACTN1-217ENST00000556203 ZAP70P43403 619 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 ZNF157P51786 506 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-217ENST00000556203 NBPF12Q5TAG4 269 aaPredicted RBP18.59■□□□□ 0.57
ACTN1-217ENST00000556203 ARMC9Q7Z3E5 817 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 TMEM39BQ9GZU3 492 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 PAPPA2Q9BXP8 1791 aa18.59■□□□□ 0.57
ACTN1-217ENST00000556203 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
ACTN1-217ENST00000556203 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
ACTN1-217ENST00000556203 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
ACTN1-217ENST00000556203 FAM163AQ96GL9 167 aaPredicted RBP18.58■□□□□ 0.56
ACTN1-217ENST00000556203 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
ACTN1-217ENST00000556203 LRRCC1Q9C099 1032 aa18.58■□□□□ 0.56
ACTN1-217ENST00000556203 DCTPP1Q9H773 170 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms