RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SIL1Q9H173 461 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 CCDC9Q9Y3X0 531 aaKnown RBP10.04□□□□□ -0.8
ATXN3-235ENST00000556082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-235ENST00000556082 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
ATXN3-235ENST00000556082 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-235ENST00000556082 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
ATXN3-235ENST00000556082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATXN3-235ENST00000556082 C8orf37Q96NL8 207 aa10.03□□□□□ -0.8
ATXN3-235ENST00000556082 CCDC8Q9H0W5 538 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-235ENST00000556082 RFX7Q2KHR2 1363 aa10.02□□□□□ -0.8
ATXN3-235ENST00000556082 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
ATXN3-235ENST00000556082 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.81
ATXN3-235ENST00000556082 PTPRNQ16849 979 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 PARP10Q53GL7 1025 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 KCNB2Q92953 911 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 HAUS7Q99871 368 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
ATXN3-235ENST00000556082 ANO2Q9NQ90 1003 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 DIAPH3Q9NSV4 1193 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 DBNLQ9UJU6 430 aaKnown RBP10.02□□□□□ -0.81
ATXN3-235ENST00000556082 USP21Q9UK80 565 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
ATXN3-235ENST00000556082 RAD50Q92878 1312 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 TJP1Q07157 1748 aa10.02□□□□□ -0.81
ATXN3-235ENST00000556082 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
ATXN3-235ENST00000556082 ITPK1Q13572 414 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 MTMR2Q13614 643 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 TTLL11Q8NHH1 800 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 FAM89AQ96GI7 184 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-235ENST00000556082 EVA1BQ9NVM1 165 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
ATXN3-235ENST00000556082 AKAP2Q9Y2D5 859 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF831Q5JPB2 1677 aa10.01□□□□□ -0.81
ATXN3-235ENST00000556082 RREB1Q92766 1687 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 DOT1LQ8TEK3 1739 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 PDE8AO60658 829 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 CAMTA2O94983 1202 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 MAP4K4O95819 1239 aaPredicted RBP10□□□□□ -0.81
ATXN3-235ENST00000556082 IFIT5Q13325 482 aaKnown RBP10□□□□□ -0.81
ATXN3-235ENST00000556082 CLEC4GQ6UXB4 293 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 BOLA2Q9H3K6 86 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
ATXN3-235ENST00000556082 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
ATXN3-235ENST00000556082 IRS4O14654 1257 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 TRIM66O15016 1216 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 KCNQ2O43526 872 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 CTSWP56202 376 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 SKOR1P84550 965 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 CWC27Q6UX04 472 aaKnown RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF512BQ96KM6 892 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 DBNDD2Q9BQY9 259 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 TM6SF1Q9BZW5 370 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 IL25Q9H293 177 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 TRMT112Q9UI30 125 aaKnown RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 RIPOR2Q9Y4F9 1068 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 CNTNAP4Q9C0A0 1308 aa9.99□□□□□ -0.81
ATXN3-235ENST00000556082 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
ATXN3-235ENST00000556082 ANKRD18BA2A2Z9 1011 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 J3QL48 77 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 NDUFV2P19404 249 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 GPTP24298 496 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 NEK4P51957 841 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 LRRC24Q50LG9 513 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-235ENST00000556082 MAP4K1Q92918 833 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-235ENST00000556082 ARXQ96QS3 562 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 UTP14AQ9BVJ6 771 aaKnown RBP9.98□□□□□ -0.81
ATXN3-235ENST00000556082 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 PALD1Q9ULE6 856 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF652Q9Y2D9 606 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 UBN2Q6ZU65 1347 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 SH3TC1Q8TE82 1336 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 RTL9Q8NET4 1388 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
ATXN3-235ENST00000556082 THSD7AQ9UPZ6 1657 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 A0A1B0GUL7 405 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 TIMM10P62072 90 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 NMIQ13287 307 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-235ENST00000556082 CUL4AQ13619 759 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 TSGA10IPQ3SY00 556 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 SUSD4Q5VX71 490 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 CLEC17AQ6ZS10 378 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 KBTBD3Q8NAB2 608 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms