RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 AGBL3Q8NEM8 1001 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 MXD3Q9BW11 206 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 PLA2G12BQ9BX93 195 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 GBA2Q9HCG7 927 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-216ENST00000556066 MED23Q9ULK4 1368 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 AKAP11Q9UKA4 1901 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 A0A1B0GUL6 1792 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 ANKRD18BA2A2Z9 1011 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 MAP2K2P36507 400 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 CASP7P55210 303 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 SCARF1Q14162 830 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
PSEN1-216ENST00000556066 SLC4A10Q6U841 1118 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 TXNRD3Q86VQ6 643 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 PLPP6Q8IY26 295 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 MCOLN1Q9GZU1 580 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 ANKRD2Q9GZV1 360 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 MYOZ2Q9NPC6 264 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF646O15015 1829 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF804BA4D1E1 1349 aa8.49□□□□□ -1.05
PSEN1-216ENST00000556066 TAF5LO75529 589 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 CSF1RP07333 972 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 KLRK1P26718 216 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF280AP59817 542 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-216ENST00000556066 CHRNDQ07001 517 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 IFIT5Q13325 482 aaKnown RBP8.48□□□□□ -1.05
PSEN1-216ENST00000556066 TAF7LQ5H9L4 462 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 BEND3Q5T5X7 828 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-216ENST00000556066 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 HHIPL1Q96JK4 782 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 GMLQ99445 158 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 COA1Q9GZY4 146 aa8.48□□□□□ -1.05
PSEN1-216ENST00000556066 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-216ENST00000556066 SCAF8Q9UPN6 1271 aaKnown RBP8.48□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF609O15014 1411 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 TK2O00142 265 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 SNAP23O00161 211 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 GRM8O00222 908 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 PLIN1O60240 522 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-216ENST00000556066 GTF2IP78347 998 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 FOXO4P98177 505 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 NOGQ13253 232 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 CCDC57Q2TAC2 916 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 NBPF9Q3BBW0 867 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 DACT2Q5SW24 774 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 TTLL5Q6EMB2 1281 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 RGMBQ6NW40 437 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 KIAA0825Q8IV33 1275 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-216ENST00000556066 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 EMILIN3Q9NT22 766 aa8.47□□□□□ -1.05
PSEN1-216ENST00000556066 BRPF1P55201 1214 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-216ENST00000556066 TTLL12Q14166 644 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-216ENST00000556066 EPHA10Q5JZY3 1008 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 SRCIN1Q9C0H9 1055 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 CNNM1Q9NRU3 951 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 MYO3BQ8WXR4 1341 aa8.46□□□□□ -1.06
PSEN1-216ENST00000556066 WNT10BO00744 389 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 CA12O43570 354 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 SASH1O94885 1247 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-216ENST00000556066 LDHAL6AQ6ZMR3 332 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 ZNF804AQ7Z570 1209 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 CD209Q9NNX6 404 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 PAPPA2Q9BXP8 1791 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 ECM29Q5VYK3 1845 aa8.45□□□□□ -1.06
PSEN1-216ENST00000556066 FAM155AB1AL88 458 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-216ENST00000556066 F8W031 263 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-216ENST00000556066 ALDH1L1O75891 902 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 DGKZQ13574 1117 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 MOB2Q70IA6 237 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 SUCLG2Q96I99 432 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 ZNF521Q96K83 1311 aa8.44□□□□□ -1.06
PSEN1-216ENST00000556066 E9PSI1 815 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 UBE2Q2LH0YL09 131 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 SEMA3EO15041 775 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 TRPA1O75762 1119 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 SLC10A3P09131 477 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 NBPF7P0C2Y1 421 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-216ENST00000556066 NF2P35240 595 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 FKBP1BP68106 108 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 PRKG1Q13976 671 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 DLGAP5Q15398 846 aa8.43□□□□□ -1.06
PSEN1-216ENST00000556066 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
PSEN1-216ENST00000556066 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
PSEN1-216ENST00000556066 TESPA1A2RU30 521 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-216ENST00000556066 TBC1D12O60347 775 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 RGS20O76081 388 aa8.42□□□□□ -1.06
PSEN1-216ENST00000556066 RBM5P52756 815 aaKnown RBP eCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms