RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GOLIM4O00461 696 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 IDH1O75874 414 aaKnown RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 CYP2E1P05181 493 aaPredicted RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 RBM5P52756 815 aaKnown RBP eCLIP9.26□□□□□ -0.93
TDP1-214ENST00000556063 ZSCAN25Q6NSZ9 544 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 CERS5Q8N5B7 392 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 TEKT1Q969V4 418 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 NOL10Q9BSC4 688 aaKnown RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 MXD3Q9BW11 206 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 MRIQ9BWK5 157 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 ADARB2Q9NS39 739 aaKnown RBP9.26□□□□□ -0.93
TDP1-214ENST00000556063 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 SRCAPQ6ZRS2 3230 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 SCN4AP35499 1836 aa9.26□□□□□ -0.93
TDP1-214ENST00000556063 TRIM6-TRIM34B2RNG4 842 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 MYO1BO43795 1136 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 PDE4AP27815 886 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 PRDX5P30044 214 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 EPHX2P34913 555 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 SCNN1DP51172 638 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 ZNF280AP59817 542 aaPredicted RBP9.25□□□□□ -0.93
TDP1-214ENST00000556063 DLGAP5Q15398 846 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 TSHZ3Q63HK5 1081 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 HHIPL2Q6UWX4 724 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 TICAM2Q86XR7 235 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 CNTROBQ8N137 903 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 ZNF526Q8TF50 670 aaPredicted RBP9.25□□□□□ -0.93
TDP1-214ENST00000556063 EVI5LQ96CN4 794 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
TDP1-214ENST00000556063 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
TDP1-214ENST00000556063 BAG3O95817 575 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 ZFYP08048 801 aaPredicted RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 EPS15P42566 896 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 CRKP46108 304 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 KIF4BQ2VIQ3 1234 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 USP50Q70EL3 339 aaPredicted RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 CERS3Q8IU89 383 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 KBTBD3Q8NAB2 608 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 FSD1Q9BTV5 496 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 MYOZ2Q9NPC6 264 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 PIH1D3Q9NQM4 214 aaKnown RBP9.24□□□□□ -0.93
TDP1-214ENST00000556063 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
TDP1-214ENST00000556063 HIP1O00291 1037 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 PLCG2P16885 1265 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 CYP7A1P22680 504 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 RGS3P49796 1198 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 MECOMQ03112 1051 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 CFAP100Q494V2 611 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 TBC1D10BQ4KMP7 808 aaPredicted RBP9.23□□□□□ -0.93
TDP1-214ENST00000556063 TTC22Q5TAA0 569 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 SLC9C2Q5TAH2 1124 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 MAGEB6Q8N7X4 407 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 MTMR14Q8NCE2 650 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 RILPL2Q969X0 211 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 NSUN4Q96CB9 384 aaKnown RBP9.23□□□□□ -0.93
TDP1-214ENST00000556063 FAM163AQ96GL9 167 aaPredicted RBP9.23□□□□□ -0.93
TDP1-214ENST00000556063 ZDHHC15Q96MV8 337 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 ANTXR1Q9H6X2 564 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 MYH2Q9UKX2 1941 aa9.23□□□□□ -0.93
TDP1-214ENST00000556063 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
TDP1-214ENST00000556063 PDE6AP16499 860 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 UBE3CQ15386 1083 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 GRIK5Q16478 980 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
TDP1-214ENST00000556063 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
TDP1-214ENST00000556063 EDC3Q96F86 508 aaKnown RBP9.22□□□□□ -0.93
TDP1-214ENST00000556063 NMRK2Q9NPI5 230 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 MYH7P12883 1935 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 MROH7-TTC4A0A0A0MT08 1334 aa9.22□□□□□ -0.93
TDP1-214ENST00000556063 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.93
TDP1-214ENST00000556063 MYO5AQ9Y4I1 1855 aaKnown RBP9.21□□□□□ -0.93
TDP1-214ENST00000556063 AK9Q5TCS8 1911 aa9.21□□□□□ -0.93
TDP1-214ENST00000556063 GPR75-ASB3A0A0A6YYF3 556 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
TDP1-214ENST00000556063 ABCB7O75027 752 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 SPDYE6P0CI01 402 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 ADD2P35612 726 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 TNFAIP1Q13829 316 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 BMP2KLQ5H9B9 411 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 LDHDQ86WU2 507 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
TDP1-214ENST00000556063 DCPSQ96C86 337 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms