RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RASSF7Q02833 373 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-208ENST00000555905 GPR162Q16538 588 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-208ENST00000555905 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
TMEM260-208ENST00000555905 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
TMEM260-208ENST00000555905 GOLGB1Q14789 3259 aaKnown RBP13.3□□□□□ -0.28
TMEM260-208ENST00000555905 PSME4Q14997 1843 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
TMEM260-208ENST00000555905 ADD2P35612 726 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 SUGT1Q9Y2Z0 365 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 RAD50Q92878 1312 aa13.29□□□□□ -0.28
TMEM260-208ENST00000555905 A0A0D9SFI3 127 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 REC8O95072 547 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 LMNB1P20700 586 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 PRDX5P30044 214 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
TMEM260-208ENST00000555905 FKBP1AP62942 108 aaKnown RBP13.28□□□□□ -0.28
TMEM260-208ENST00000555905 GSTO1P78417 241 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 MECOMQ03112 1051 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 ZMYM1Q5SVZ6 1142 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 NAA16Q6N069 864 aaPredicted RBP13.28□□□□□ -0.28
TMEM260-208ENST00000555905 APPBP2Q92624 585 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
TMEM260-208ENST00000555905 KCNQ5Q9NR82 932 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 COL4A5P29400 1685 aa13.28□□□□□ -0.28
TMEM260-208ENST00000555905 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.28
TMEM260-208ENST00000555905 TCRBV5S4A2TA0A5A2 114 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 SGSM2O43147 1006 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 GRIN3BO60391 1043 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 CYP7A1P22680 504 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 SLF2Q8IX21 1173 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 NSUN4Q96CB9 384 aaKnown RBP13.27□□□□□ -0.29
TMEM260-208ENST00000555905 MAST3O60307 1309 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 SBF1O95248 1867 aa13.27□□□□□ -0.29
TMEM260-208ENST00000555905 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
TMEM260-208ENST00000555905 RAD17O75943 681 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 CHGBP05060 677 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 LDHCP07864 332 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
TMEM260-208ENST00000555905 TNIP1Q15025 636 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
TMEM260-208ENST00000555905 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 PSMD14O00487 310 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 SEC24BO95487 1268 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 PRELPP51888 382 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 AIDAQ96BJ3 306 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 ANO2Q9NQ90 1003 aa13.25□□□□□ -0.29
TMEM260-208ENST00000555905 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
TMEM260-208ENST00000555905 MAGEB6P1A0A0J9YX57 407 aa13.24□□□□□ -0.29
TMEM260-208ENST00000555905 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
TMEM260-208ENST00000555905 M0R2C6 588 aa13.24□□□□□ -0.29
TMEM260-208ENST00000555905 CXCL9Q07325 125 aa13.24□□□□□ -0.29
TMEM260-208ENST00000555905 GRIK5Q16478 980 aa13.24□□□□□ -0.29
TMEM260-208ENST00000555905 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
TMEM260-208ENST00000555905 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
TMEM260-208ENST00000555905 MROH7-TTC4A0A0A0MT08 1334 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 FZD9O00144 591 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 GPAA1O43292 621 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 MBD4O95243 580 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 BAG3O95817 575 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 CCDC129Q6ZRS4 1044 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
TMEM260-208ENST00000555905 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 IL25Q9H293 177 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
TMEM260-208ENST00000555905 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 EPB41L2O43491 1005 aaKnown RBP13.22□□□□□ -0.29
TMEM260-208ENST00000555905 GNAT2P19087 354 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms