RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RNF113AO15541 343 aaKnown RBP15.07■□□□□ 0
SHMT2-221ENST00000555773 USP17L8P0C7I0 530 aa15.07■□□□□ 0
SHMT2-221ENST00000555773 MECOMQ03112 1051 aa15.07■□□□□ 0
SHMT2-221ENST00000555773 DZIP1Q86YF9 867 aaKnown RBP15.07■□□□□ 0
SHMT2-221ENST00000555773 HDAC9Q9UKV0 1011 aa15.07■□□□□ 0
SHMT2-221ENST00000555773 TTF2Q9UNY4 1162 aaKnown RBP15.07■□□□□ 0
SHMT2-221ENST00000555773 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
SHMT2-221ENST00000555773 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
SHMT2-221ENST00000555773 GLTPD2A6NH11 291 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 ADD2P35612 726 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 GMPSP49915 693 aaPredicted RBP15.06■□□□□ 0
SHMT2-221ENST00000555773 GRIK5Q16478 980 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
SHMT2-221ENST00000555773 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 KIAA0825Q8IV33 1275 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 SERPINA10Q9UK55 444 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 RFX7Q2KHR2 1363 aa15.06■□□□□ 0
SHMT2-221ENST00000555773 DDNO94850 711 aaPredicted RBP15.05■□□□□ -0
SHMT2-221ENST00000555773 PDE6AP16499 860 aa15.05■□□□□ -0
SHMT2-221ENST00000555773 MAGEB6Q8N7X4 407 aa15.05■□□□□ -0
SHMT2-221ENST00000555773 F8W031 263 aaPredicted RBP15.04■□□□□ -0
SHMT2-221ENST00000555773 H7C1D1 291 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 CYP7A1P22680 504 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 ZNF280AP59817 542 aaPredicted RBP15.04■□□□□ -0
SHMT2-221ENST00000555773 CASC1Q6TDU7 716 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 TEKT1Q969V4 418 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
SHMT2-221ENST00000555773 HELLSQ9NRZ9 838 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 DIAPH3Q9NSV4 1193 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 CNOT7Q9UIV1 285 aaKnown RBP15.04■□□□□ -0
SHMT2-221ENST00000555773 AKAP11Q9UKA4 1901 aa15.04■□□□□ -0
SHMT2-221ENST00000555773 ZNF532Q9HCE3 1301 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 TCRBV5S4A2TA0A5A2 114 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 CDC45O75419 566 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 BAG3O95817 575 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 CHMLP26374 656 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 ZMYM1Q5SVZ6 1142 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 CERS3Q8IU89 383 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 MTMR14Q8NCE2 650 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 ZNF384Q8TF68 577 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 RUFY2Q8WXA3 655 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 APPBP2Q92624 585 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 ZDHHC15Q96MV8 337 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 GPRC5DQ9NZD1 345 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 SBF1O95248 1867 aa15.03■□□□□ -0
SHMT2-221ENST00000555773 CHD4Q14839 1912 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 GAKO14976 1311 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 GPR75-ASB3A0A0A6YYF3 556 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 LMOD1P29536 600 aaPredicted RBP15.02■□□□□ -0
SHMT2-221ENST00000555773 CRKP46108 304 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 SCNN1DP51172 638 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 PPP4CP60510 307 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 DIXDC1Q155Q3 683 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 MICALL2Q8IY33 904 aa15.02■□□□□ -0
SHMT2-221ENST00000555773 NOL10Q9BSC4 688 aaKnown RBP15.02■□□□□ -0
SHMT2-221ENST00000555773 MROH7-TTC4A0A0A0MT08 1334 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 PLCG2P16885 1265 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 RBM5P52756 815 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHMT2-221ENST00000555773 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 MCMDC2Q4G0Z9 681 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 MYOZ2Q9NPC6 264 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 DAGLAQ9Y4D2 1042 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 SCN9AQ15858 1988 aa15.01□□□□□ -0.01
SHMT2-221ENST00000555773 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
SHMT2-221ENST00000555773 IQCA1LA6NCM1 817 aa15□□□□□ -0.01
SHMT2-221ENST00000555773 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 MFAP1P55081 439 aaKnown RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 NMIQ13287 307 aaPredicted RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 CWC27Q6UX04 472 aaKnown RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 OSBP2Q969R2 916 aa15□□□□□ -0.01
SHMT2-221ENST00000555773 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
SHMT2-221ENST00000555773 EPS15P42566 896 aa14.99□□□□□ -0.01
SHMT2-221ENST00000555773 ADGRA1Q86SQ6 560 aa14.99□□□□□ -0.01
SHMT2-221ENST00000555773 AIDAQ96BJ3 306 aa14.99□□□□□ -0.01
SHMT2-221ENST00000555773 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-221ENST00000555773 FAM227BQ96M60 508 aa14.99□□□□□ -0.01
SHMT2-221ENST00000555773 PUS7LQ9H0K6 701 aaKnown RBP14.99□□□□□ -0.01
SHMT2-221ENST00000555773 ADARB2Q9NS39 739 aaKnown RBP14.99□□□□□ -0.01
SHMT2-221ENST00000555773 HACL1Q9UJ83 578 aa14.99□□□□□ -0.01
SHMT2-221ENST00000555773 RAD50Q92878 1312 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 MYO1BO43795 1136 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 CHGBP05060 677 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 GNAT2P19087 354 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 BTDP43251 543 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 MIGA1Q8NAN2 632 aa14.98□□□□□ -0.01
SHMT2-221ENST00000555773 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-221ENST00000555773 STRBPQ96SI9 672 aaKnown RBP14.98□□□□□ -0.01
SHMT2-221ENST00000555773 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
SHMT2-221ENST00000555773 AATFQ9NY61 560 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHMT2-221ENST00000555773 A0A0D9SFI3 127 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 SGSM2O43147 1006 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-221ENST00000555773 KIF4BQ2VIQ3 1234 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 RBM26Q5T8P6 1007 aaKnown RBP14.97□□□□□ -0.01
SHMT2-221ENST00000555773 USP50Q70EL3 339 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms