RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 MAP4K1Q92918 833 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 YDJCA8MPS7 323 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 F8W031 263 aaPredicted RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 SPTY2D1Q68D10 685 aaPredicted RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 ZGPATQ8N5A5 531 aaKnown RBP12.25□□□□□ -0.45
SRP54-208ENST00000555557 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
SRP54-208ENST00000555557 CHD4Q14839 1912 aa12.24□□□□□ -0.45
SRP54-208ENST00000555557 MBD4O95243 580 aa12.24□□□□□ -0.45
SRP54-208ENST00000555557 RASSF7Q02833 373 aa12.24□□□□□ -0.45
SRP54-208ENST00000555557 KIF2CQ99661 725 aa12.24□□□□□ -0.45
SRP54-208ENST00000555557 RBM8AQ9Y5S9 174 aaKnown RBP12.24□□□□□ -0.45
SRP54-208ENST00000555557 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
SRP54-208ENST00000555557 FOXP2O15409 715 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 HSPA4P34932 840 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
SRP54-208ENST00000555557 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
SRP54-208ENST00000555557 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 STRBPQ96SI9 672 aaKnown RBP12.23□□□□□ -0.45
SRP54-208ENST00000555557 PRKAB2O43741 272 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
SRP54-208ENST00000555557 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 COL4A5P29400 1685 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 DOCK2Q92608 1830 aa12.23□□□□□ -0.45
SRP54-208ENST00000555557 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 RAD17O75943 681 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 MCCP23508 829 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 PRELPP51888 382 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 STRIP1Q5VSL9 837 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
SRP54-208ENST00000555557 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
SRP54-208ENST00000555557 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.45
SRP54-208ENST00000555557 APPP05067 770 aa12.21□□□□□ -0.45
SRP54-208ENST00000555557 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
SRP54-208ENST00000555557 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
SRP54-208ENST00000555557 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
SRP54-208ENST00000555557 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
SRP54-208ENST00000555557 MYH7P12883 1935 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 SLC27A2O14975 620 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 FGAP02671 866 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 SCNN1DP51172 638 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 KIAA0825Q8IV33 1275 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 NIM1KQ8IY84 436 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 VPS33BQ9H267 617 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.46
SRP54-208ENST00000555557 SNX14Q9Y5W7 946 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.46
SRP54-208ENST00000555557 YBX3P16989 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRP54-208ENST00000555557 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
SRP54-208ENST00000555557 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
SRP54-208ENST00000555557 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
SRP54-208ENST00000555557 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
SRP54-208ENST00000555557 PSMD14O00487 310 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 CYP21A2P08686 494 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 GSTO1P78417 241 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
SRP54-208ENST00000555557 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
SRP54-208ENST00000555557 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
SRP54-208ENST00000555557 LDHCP07864 332 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 HAND2P61296 217 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 ADCK5Q3MIX3 580 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 MROH7-TTC4A0A0A0MT08 1334 aa12.19□□□□□ -0.46
SRP54-208ENST00000555557 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 BTDP43251 543 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 CXCL9Q07325 125 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
SRP54-208ENST00000555557 SH3RF3Q8TEJ3 882 aaPredicted RBP12.18□□□□□ -0.46
SRP54-208ENST00000555557 KCNB2Q92953 911 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
SRP54-208ENST00000555557 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 CPA1P15085 419 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 GNAT2P19087 354 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 ANAPC15P60006 121 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 FKBP1AP62942 108 aaKnown RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 GPR75-ASB3A0A0A6YYF3 556 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms