RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 SALL1Q9NSC2 1324 aa25.14■■□□□ 1.61
FOXN3-209ENST00000555353 TLR7Q9NYK1 1049 aaKnown RBP25.14■■□□□ 1.61
FOXN3-209ENST00000555353 TRPM7Q96QT4 1865 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 TRAF5O00463 557 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 MYO1BO43795 1136 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 USP48Q86UV5 1035 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 SPATA5Q8NB90 893 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 ZBED3Q96IU2 234 aaPredicted RBP25.13■■□□□ 1.61
FOXN3-209ENST00000555353 DCTPP1Q9H773 170 aa25.13■■□□□ 1.61
FOXN3-209ENST00000555353 PITPNM2Q9BZ72 1349 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 SPDYE2BA6NHP3 402 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 LDHBP07195 334 aaKnown RBP25.12■■□□□ 1.61
FOXN3-209ENST00000555353 SPDYE6P0CI01 402 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 HDLBPQ00341 1268 aaKnown RBP25.12■■□□□ 1.61
FOXN3-209ENST00000555353 TEKT1Q969V4 418 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 LRRCC1Q9C099 1032 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 HMG20BQ9P0W2 317 aa25.12■■□□□ 1.61
FOXN3-209ENST00000555353 IFIT2P09913 472 aaKnown RBP25.11■■□□□ 1.61
FOXN3-209ENST00000555353 MCAMP43121 646 aa25.11■■□□□ 1.61
FOXN3-209ENST00000555353 CRKP46108 304 aa25.11■■□□□ 1.61
FOXN3-209ENST00000555353 HDAC1Q13547 482 aaPredicted RBP25.11■■□□□ 1.61
FOXN3-209ENST00000555353 ABCF2Q9UG63 623 aa25.11■■□□□ 1.61
FOXN3-209ENST00000555353 PCDHAC2Q9Y5I4 1007 aa25.11■■□□□ 1.61
FOXN3-209ENST00000555353 PRDX5P30044 214 aa25.1■■□□□ 1.61
FOXN3-209ENST00000555353 PI16Q6UXB8 463 aa25.1■■□□□ 1.61
FOXN3-209ENST00000555353 PRMT6Q96LA8 375 aaPredicted RBP25.1■■□□□ 1.61
FOXN3-209ENST00000555353 ADM5C9JUS6 153 aa25.1■■□□□ 1.61
FOXN3-209ENST00000555353 FMR1Q06787 632 aaKnown RBP eCLIP25.1■■□□□ 1.61
FOXN3-209ENST00000555353 SPTY2D1Q68D10 685 aaPredicted RBP25.1■■□□□ 1.61
FOXN3-209ENST00000555353 B4GALNT3Q6L9W6 998 aa25.1■■□□□ 1.61
FOXN3-209ENST00000555353 ZNF512BQ96KM6 892 aaPredicted RBP25.1■■□□□ 1.61
FOXN3-209ENST00000555353 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
FOXN3-209ENST00000555353 MRIQ9BWK5 157 aa25.09■■□□□ 1.61
FOXN3-209ENST00000555353 TMEM88BA6NKF7 163 aa25.08■■□□□ 1.61
FOXN3-209ENST00000555353 APOBEC3FQ8IUX4 373 aaKnown RBP25.08■■□□□ 1.61
FOXN3-209ENST00000555353 CREBZFQ9NS37 354 aa25.08■■□□□ 1.61
FOXN3-209ENST00000555353 HHIPL2Q6UWX4 724 aa25.07■■□□□ 1.6
FOXN3-209ENST00000555353 DZIP1Q86YF9 867 aaKnown RBP25.07■■□□□ 1.6
FOXN3-209ENST00000555353 ZNF408Q9H9D4 720 aa25.07■■□□□ 1.6
FOXN3-209ENST00000555353 SNRKQ9NRH2 765 aa25.07■■□□□ 1.6
FOXN3-209ENST00000555353 CLRN2A0PK11 232 aa25.06■■□□□ 1.6
FOXN3-209ENST00000555353 HTRA3P83110 453 aa25.06■■□□□ 1.6
FOXN3-209ENST00000555353 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
FOXN3-209ENST00000555353 ZDHHC15Q96MV8 337 aa25.06■■□□□ 1.6
FOXN3-209ENST00000555353 SCAF8Q9UPN6 1271 aaKnown RBP25.06■■□□□ 1.6
FOXN3-209ENST00000555353 MYH2Q9UKX2 1941 aa25.06■■□□□ 1.6
FOXN3-209ENST00000555353 SMARCA5O60264 1052 aaPredicted RBP25.05■■□□□ 1.6
FOXN3-209ENST00000555353 CELF2O95319 508 aaKnown RBP25.05■■□□□ 1.6
FOXN3-209ENST00000555353 VEZTQ9HBM0 779 aa25.05■■□□□ 1.6
FOXN3-209ENST00000555353 CEP350Q5VT06 3117 aa25.05■■□□□ 1.6
FOXN3-209ENST00000555353 DIXDC1Q155Q3 683 aa25.05■■□□□ 1.6
FOXN3-209ENST00000555353 DLK2Q6UY11 383 aa25.05■■□□□ 1.6
FOXN3-209ENST00000555353 TBC1D9Q6ZT07 1266 aa25.05■■□□□ 1.6
FOXN3-209ENST00000555353 CENPQQ7L2Z9 268 aaPredicted RBP25.05■■□□□ 1.6
FOXN3-209ENST00000555353 TDRD3Q9H7E2 651 aaKnown RBP25.05■■□□□ 1.6
FOXN3-209ENST00000555353 SLF2Q8IX21 1173 aa25.04■■□□□ 1.6
FOXN3-209ENST00000555353 LRP2BPQ9P2M1 347 aa25.04■■□□□ 1.6
FOXN3-209ENST00000555353 IGHDP01880 384 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 SPDYE2Q495Y8 402 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 CST9Q5W186 159 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 GCC1Q96CN9 775 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 CDCA5Q96FF9 252 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 RAI14Q9P0K7 980 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 ZNF70Q9UC06 446 aaPredicted RBP25.03■■□□□ 1.6
FOXN3-209ENST00000555353 AOX1Q06278 1338 aa25.03■■□□□ 1.6
FOXN3-209ENST00000555353 ZAP70P43403 619 aa25.02■■□□□ 1.6
FOXN3-209ENST00000555353 ZBTB47Q9UFB7 747 aaPredicted RBP25.02■■□□□ 1.6
FOXN3-209ENST00000555353 ABT1Q9ULW3 272 aaKnown RBP25.02■■□□□ 1.6
FOXN3-209ENST00000555353 DAGLAQ9Y4D2 1042 aa25.02■■□□□ 1.6
FOXN3-209ENST00000555353 TNFAIP1Q13829 316 aa25.01■■□□□ 1.59
FOXN3-209ENST00000555353 APOBEC3HQ6NTF7 200 aaKnown RBP25.01■■□□□ 1.59
FOXN3-209ENST00000555353 TMOD2Q9NZR1 351 aa25.01■■□□□ 1.59
FOXN3-209ENST00000555353 CYP2E1P05181 493 aaPredicted RBP25.01■■□□□ 1.59
FOXN3-209ENST00000555353 MECOMQ03112 1051 aa25.01■■□□□ 1.59
FOXN3-209ENST00000555353 DEFB129Q9H1M3 183 aa25.01■■□□□ 1.59
FOXN3-209ENST00000555353 MYO5AQ9Y4I1 1855 aaKnown RBP25■■□□□ 1.59
FOXN3-209ENST00000555353 GSTO1P78417 241 aa25■■□□□ 1.59
FOXN3-209ENST00000555353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.99■■□□□ 1.59
FOXN3-209ENST00000555353 PPP2R3BQ9Y5P8 575 aa24.99■■□□□ 1.59
FOXN3-209ENST00000555353 PRAMEF18Q5VWM3 479 aa24.98■■□□□ 1.59
FOXN3-209ENST00000555353 NSUN4Q96CB9 384 aaKnown RBP24.98■■□□□ 1.59
FOXN3-209ENST00000555353 NDUFB9Q9Y6M9 179 aa24.98■■□□□ 1.59
FOXN3-209ENST00000555353 MAST2Q6P0Q8 1798 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 GAKO14976 1311 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 TCP10L2B9ZVM9 353 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 LDHCP07864 332 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 NF2P35240 595 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 TNNI2P48788 182 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 SMC5Q8IY18 1101 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 C2orf69Q8N8R5 385 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 GPATCH3Q96I76 525 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 GBA2Q9HCG7 927 aaPredicted RBP24.97■■□□□ 1.59
FOXN3-209ENST00000555353 MROH7-TTC4A0A0A0MT08 1334 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 RASA3Q14644 834 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 ANKRD45Q5TZF3 282 aa24.97■■□□□ 1.59
FOXN3-209ENST00000555353 FAM163AQ96GL9 167 aaPredicted RBP24.97■■□□□ 1.59
FOXN3-209ENST00000555353 PIH1D3Q9NQM4 214 aaKnown RBP24.97■■□□□ 1.59
FOXN3-209ENST00000555353 IGSF3O75054 1194 aa24.96■■□□□ 1.59
FOXN3-209ENST00000555353 ATP5JP18859 108 aa24.96■■□□□ 1.59
FOXN3-209ENST00000555353 CACNB3P54284 484 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms