RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 JAG2Q9Y219 1238 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 UBE2Q2LH0YL09 131 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 PPP1R12BO60237 982 aaPredicted RBP14.7□□□□□ -0.06
VRK1-204ENST00000555351 CHAF1AQ13111 956 aaPredicted RBP14.7□□□□□ -0.06
VRK1-204ENST00000555351 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
VRK1-204ENST00000555351 FKBP1CQ5VVH2 108 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 PRAMEF18Q5VWM3 479 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 HHIPL2Q6UWX4 724 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 ZNF70Q9UC06 446 aaPredicted RBP14.7□□□□□ -0.06
VRK1-204ENST00000555351 SCAF8Q9UPN6 1271 aaKnown RBP14.7□□□□□ -0.06
VRK1-204ENST00000555351 AKAP2Q9Y2D5 859 aa14.7□□□□□ -0.06
VRK1-204ENST00000555351 PDS5AQ29RF7 1337 aaKnown RBP14.69□□□□□ -0.06
VRK1-204ENST00000555351 SALL1Q9NSC2 1324 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 CLRN2A0PK11 232 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 TNNI2P48788 182 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 CSRNP1Q96S65 589 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 ZIC5Q96T25 663 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 DENND2AQ9ULE3 1009 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 IQSEC3Q9UPP2 1182 aaPredicted RBP14.69□□□□□ -0.06
VRK1-204ENST00000555351 PA2G4Q9UQ80 394 aaKnown RBP14.69□□□□□ -0.06
VRK1-204ENST00000555351 PCDHAC2Q9Y5I4 1007 aa14.69□□□□□ -0.06
VRK1-204ENST00000555351 AKAP11Q9UKA4 1901 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 LAMB1P07942 1786 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 RASA3Q14644 834 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 MOB2Q70IA6 237 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 CLUAP1Q96AJ1 413 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 VEZTQ9HBM0 779 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 SSC5DA1L4H1 1573 aa14.68□□□□□ -0.06
VRK1-204ENST00000555351 TM4SF4P48230 202 aa14.67□□□□□ -0.06
VRK1-204ENST00000555351 GRIK5Q16478 980 aa14.67□□□□□ -0.06
VRK1-204ENST00000555351 FAM83AQ86UY5 434 aa14.67□□□□□ -0.06
VRK1-204ENST00000555351 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
VRK1-204ENST00000555351 ZGPATQ8N5A5 531 aaKnown RBP14.67□□□□□ -0.06
VRK1-204ENST00000555351 TDRD3Q9H7E2 651 aaKnown RBP14.67□□□□□ -0.06
VRK1-204ENST00000555351 ANGEL1Q9UNK9 670 aaKnown RBP14.67□□□□□ -0.06
VRK1-204ENST00000555351 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
VRK1-204ENST00000555351 AOX1Q06278 1338 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 ZBTB48P10074 688 aaPredicted RBP14.66□□□□□ -0.06
VRK1-204ENST00000555351 MS4A1P11836 297 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 IREB2P48200 963 aaKnown RBP14.66□□□□□ -0.06
VRK1-204ENST00000555351 INHBEP58166 350 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 SREBF2Q12772 1141 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 MVPQ14764 893 aaKnown RBP14.66□□□□□ -0.06
VRK1-204ENST00000555351 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 RNF186Q9NXI6 227 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 TMOD2Q9NZR1 351 aa14.66□□□□□ -0.06
VRK1-204ENST00000555351 RPAP1Q9BWH6 1393 aaPredicted RBP14.65□□□□□ -0.06
VRK1-204ENST00000555351 A0A1B0GUL7 405 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
VRK1-204ENST00000555351 NBPF12Q5TAG4 269 aaPredicted RBP14.65□□□□□ -0.06
VRK1-204ENST00000555351 SPRYD7Q5W111 196 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 APOBEC3HQ6NTF7 200 aaKnown RBP14.65□□□□□ -0.06
VRK1-204ENST00000555351 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 SLC10A4Q96EP9 437 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 TEPSINQ96N21 525 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 CFHR5Q9BXR6 569 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
VRK1-204ENST00000555351 PNMA6EA0A0J9YXQ4 647 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
VRK1-204ENST00000555351 LDHBP07195 334 aaKnown RBP14.64□□□□□ -0.07
VRK1-204ENST00000555351 PHKA1P46020 1223 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 ATP8B2P98198 1209 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 TFCP2Q12800 502 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.07
VRK1-204ENST00000555351 POLA2Q14181 598 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 ANKRD13AQ8IZ07 590 aa14.64□□□□□ -0.07
VRK1-204ENST00000555351 MANSC4A6NHS7 340 aaPredicted RBP14.63□□□□□ -0.07
VRK1-204ENST00000555351 USP2O75604 605 aaPredicted RBP14.63□□□□□ -0.07
VRK1-204ENST00000555351 TRPA1O75762 1119 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 ALDH1A1P00352 501 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 TIMM10P62072 90 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 PRKG1Q13976 671 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 XAGE2Q96GT9 111 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 TSKSQ9UJT2 592 aa14.63□□□□□ -0.07
VRK1-204ENST00000555351 TCP10L2B9ZVM9 353 aa14.62□□□□□ -0.07
VRK1-204ENST00000555351 IGSF3O75054 1194 aa14.62□□□□□ -0.07
VRK1-204ENST00000555351 SPTY2D1Q68D10 685 aaPredicted RBP14.62□□□□□ -0.07
VRK1-204ENST00000555351 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
VRK1-204ENST00000555351 SLF2Q8IX21 1173 aa14.62□□□□□ -0.07
VRK1-204ENST00000555351 FAM163AQ96GL9 167 aaPredicted RBP14.62□□□□□ -0.07
VRK1-204ENST00000555351 RLBP1P12271 317 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 PRDX5P30044 214 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 ADORA1P30542 326 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 WNK4Q96J92 1243 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 TMEM39BQ9GZU3 492 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
VRK1-204ENST00000555351 DAGLAQ9Y4D2 1042 aa14.61□□□□□ -0.07
VRK1-204ENST00000555351 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 UQCRFS1P1P0C7P4 283 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
VRK1-204ENST00000555351 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.6□□□□□ -0.07
VRK1-204ENST00000555351 FAM151AQ8WW52 585 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 ABHD8Q96I13 439 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 GAKO14976 1311 aa14.6□□□□□ -0.07
VRK1-204ENST00000555351 MAP4K4O95819 1239 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms