RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
PTPN21-207ENST00000555243 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
PTPN21-207ENST00000555243 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
PTPN21-207ENST00000555243 TEKT1Q969V4 418 aa16.96■□□□□ 0.31
PTPN21-207ENST00000555243 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
PTPN21-207ENST00000555243 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
PTPN21-207ENST00000555243 TCP10L2B9ZVM9 353 aa16.95■□□□□ 0.3
PTPN21-207ENST00000555243 EYA2O00167 538 aa16.95■□□□□ 0.3
PTPN21-207ENST00000555243 FKTNO75072 461 aa16.95■□□□□ 0.3
PTPN21-207ENST00000555243 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
PTPN21-207ENST00000555243 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
PTPN21-207ENST00000555243 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
PTPN21-207ENST00000555243 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
PTPN21-207ENST00000555243 BCAMP50895 628 aa16.94■□□□□ 0.3
PTPN21-207ENST00000555243 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
PTPN21-207ENST00000555243 CLMNQ96JQ2 1002 aa16.94■□□□□ 0.3
PTPN21-207ENST00000555243 SUGT1Q9Y2Z0 365 aa16.94■□□□□ 0.3
PTPN21-207ENST00000555243 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 IFNL1Q8IU54 200 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 LPIN2Q92539 896 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 HOOK2Q96ED9 719 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 CFHR5Q9BXR6 569 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 GNL3LQ9NVN8 582 aaKnown RBP16.93■□□□□ 0.3
PTPN21-207ENST00000555243 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
PTPN21-207ENST00000555243 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
PTPN21-207ENST00000555243 WDR66Q8TBY9 1149 aa16.92■□□□□ 0.3
PTPN21-207ENST00000555243 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
PTPN21-207ENST00000555243 CSADQ9Y600 493 aa16.92■□□□□ 0.3
PTPN21-207ENST00000555243 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
PTPN21-207ENST00000555243 AOX1Q06278 1338 aa16.92■□□□□ 0.3
PTPN21-207ENST00000555243 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 SOX10P56693 466 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
PTPN21-207ENST00000555243 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 SIL1Q9H173 461 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 HPS5Q9UPZ3 1129 aa16.91■□□□□ 0.3
PTPN21-207ENST00000555243 TNRC18O15417 2968 aaPredicted RBP16.9■□□□□ 0.3
PTPN21-207ENST00000555243 CIAO1O76071 339 aa16.9■□□□□ 0.3
PTPN21-207ENST00000555243 FGFR2P21802 821 aa16.9■□□□□ 0.3
PTPN21-207ENST00000555243 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
PTPN21-207ENST00000555243 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
PTPN21-207ENST00000555243 ZDHHC15Q96MV8 337 aa16.9■□□□□ 0.3
PTPN21-207ENST00000555243 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-207ENST00000555243 RFX5P48382 616 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-207ENST00000555243 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
PTPN21-207ENST00000555243 GRIK5Q16478 980 aa16.89■□□□□ 0.29
PTPN21-207ENST00000555243 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
PTPN21-207ENST00000555243 SLC34A2O95436 690 aa16.88■□□□□ 0.29
PTPN21-207ENST00000555243 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
PTPN21-207ENST00000555243 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
PTPN21-207ENST00000555243 HHIPL2Q6UWX4 724 aa16.88■□□□□ 0.29
PTPN21-207ENST00000555243 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
PTPN21-207ENST00000555243 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
PTPN21-207ENST00000555243 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTPN21-207ENST00000555243 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
PTPN21-207ENST00000555243 GNAI3P08754 354 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 CACNB3P54284 484 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 DCAF15Q66K64 600 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 ATG9AQ7Z3C6 839 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 ERO1AQ96HE7 468 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
PTPN21-207ENST00000555243 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
PTPN21-207ENST00000555243 GTF2A2P52657 109 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
PTPN21-207ENST00000555243 VGLL4Q14135 290 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 ARHGAP45Q92619 1136 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 TRIM17Q9Y577 477 aa16.86■□□□□ 0.29
PTPN21-207ENST00000555243 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
PTPN21-207ENST00000555243 SEMA3EO15041 775 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 GJA5P36382 358 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 ARHGEF6Q15052 776 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 APOBEC3HQ6NTF7 200 aaKnown RBP16.85■□□□□ 0.29
PTPN21-207ENST00000555243 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.85■□□□□ 0.29
PTPN21-207ENST00000555243 CDAN1Q8IWY9 1227 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
PTPN21-207ENST00000555243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTPN21-207ENST00000555243 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
PTPN21-207ENST00000555243 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
PTPN21-207ENST00000555243 CRHR2Q13324 411 aa16.84■□□□□ 0.29
PTPN21-207ENST00000555243 CCL15Q16663 113 aa16.84■□□□□ 0.29
PTPN21-207ENST00000555243 MEIS3Q99687 375 aa16.84■□□□□ 0.29
PTPN21-207ENST00000555243 ZFYVE28Q9HCC9 887 aa16.84■□□□□ 0.29
PTPN21-207ENST00000555243 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
PTPN21-207ENST00000555243 SP3Q02447 781 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 TAF1CQ15572 869 aaPredicted RBP16.83■□□□□ 0.28
PTPN21-207ENST00000555243 INTS3Q68E01 1043 aaKnown RBP16.83■□□□□ 0.28
PTPN21-207ENST00000555243 ERO1BQ86YB8 467 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 FAM151AQ8WW52 585 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 ZNF341Q9BYN7 854 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
PTPN21-207ENST00000555243 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
PTPN21-207ENST00000555243 SPDYE5A6NIY4 337 aa16.82■□□□□ 0.28
PTPN21-207ENST00000555243 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms