RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 C9orf78Q9NZ63 289 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-212ENST00000555231 HTTP42858 3142 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 CRKP46108 304 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-212ENST00000555231 SERPINA10Q9UK55 444 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-212ENST00000555231 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
XRCC3-212ENST00000555231 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
XRCC3-212ENST00000555231 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
XRCC3-212ENST00000555231 CCL15Q16663 113 aa16.6■□□□□ 0.25
XRCC3-212ENST00000555231 HABP4Q5JVS0 413 aaKnown RBP16.6■□□□□ 0.25
XRCC3-212ENST00000555231 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
XRCC3-212ENST00000555231 ARMC5Q96C12 935 aa16.6■□□□□ 0.25
XRCC3-212ENST00000555231 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
XRCC3-212ENST00000555231 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
XRCC3-212ENST00000555231 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-212ENST00000555231 VGLL4Q14135 290 aa16.59■□□□□ 0.25
XRCC3-212ENST00000555231 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
XRCC3-212ENST00000555231 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
XRCC3-212ENST00000555231 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
XRCC3-212ENST00000555231 ALDH1L1O75891 902 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 TNNI2P48788 182 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 CACNB3P54284 484 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
XRCC3-212ENST00000555231 KAZALD1Q96I82 304 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
XRCC3-212ENST00000555231 MYCP01106 439 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-212ENST00000555231 GTF2A2P52657 109 aa16.57■□□□□ 0.24
XRCC3-212ENST00000555231 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
XRCC3-212ENST00000555231 RIPOR2Q9Y4F9 1068 aa16.57■□□□□ 0.24
XRCC3-212ENST00000555231 CSADQ9Y600 493 aa16.57■□□□□ 0.24
XRCC3-212ENST00000555231 CENPFP49454 3210 aa16.57■□□□□ 0.24
XRCC3-212ENST00000555231 MKI67P46013 3256 aaKnown RBP16.56■□□□□ 0.24
XRCC3-212ENST00000555231 ECM2O94769 699 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-212ENST00000555231 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
XRCC3-212ENST00000555231 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
XRCC3-212ENST00000555231 FBXO33Q7Z6M2 555 aa16.56■□□□□ 0.24
XRCC3-212ENST00000555231 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
XRCC3-212ENST00000555231 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
XRCC3-212ENST00000555231 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
XRCC3-212ENST00000555231 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
XRCC3-212ENST00000555231 SPDYE5A6NIY4 337 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 METTL24Q5JXM2 366 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-212ENST00000555231 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 BICC1Q9H694 974 aaKnown RBP16.54■□□□□ 0.24
XRCC3-212ENST00000555231 SNCAIPQ9Y6H5 919 aa16.54■□□□□ 0.24
XRCC3-212ENST00000555231 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 BRCA2P51587 3418 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 AK9Q5TCS8 1911 aa16.53■□□□□ 0.24
XRCC3-212ENST00000555231 BTBD19C9JJ37 291 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 BCAMP50895 628 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
XRCC3-212ENST00000555231 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 TBC1D22AQ8WUA7 517 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.24
XRCC3-212ENST00000555231 IRF6O14896 467 aa16.51■□□□□ 0.23
XRCC3-212ENST00000555231 TLR2O60603 784 aa16.51■□□□□ 0.23
XRCC3-212ENST00000555231 CETPP11597 493 aa16.51■□□□□ 0.23
XRCC3-212ENST00000555231 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
XRCC3-212ENST00000555231 UTYO14607 1347 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-212ENST00000555231 PDE8BO95263 885 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-212ENST00000555231 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 KIF22Q14807 665 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-212ENST00000555231 APOBEC3HQ6NTF7 200 aaKnown RBP16.5■□□□□ 0.23
XRCC3-212ENST00000555231 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 ZDHHC15Q96MV8 337 aa16.5■□□□□ 0.23
XRCC3-212ENST00000555231 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
XRCC3-212ENST00000555231 PPIL2Q13356 520 aa16.49■□□□□ 0.23
XRCC3-212ENST00000555231 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
XRCC3-212ENST00000555231 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
XRCC3-212ENST00000555231 INPP5BP32019 993 aa16.48■□□□□ 0.23
XRCC3-212ENST00000555231 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
XRCC3-212ENST00000555231 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
XRCC3-212ENST00000555231 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
XRCC3-212ENST00000555231 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
XRCC3-212ENST00000555231 ANP32CO43423 234 aa16.47■□□□□ 0.23
XRCC3-212ENST00000555231 CTGFP29279 349 aa16.47■□□□□ 0.23
XRCC3-212ENST00000555231 FKBP1CQ5VVH2 108 aa16.47■□□□□ 0.23
XRCC3-212ENST00000555231 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
XRCC3-212ENST00000555231 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms