RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 EFCC1Q9HA90 598 aa19.49■□□□□ 0.71
NEDD1-207ENST00000555114 CSADQ9Y600 493 aa19.49■□□□□ 0.71
NEDD1-207ENST00000555114 LAMB1P07942 1786 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 TCP10L2B9ZVM9 353 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 GJA5P36382 358 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
NEDD1-207ENST00000555114 CD99L2Q8TCZ2 262 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 TMOD2Q9NZR1 351 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 PTPN22Q9Y2R2 807 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 UTYO14607 1347 aa19.48■□□□□ 0.71
NEDD1-207ENST00000555114 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
NEDD1-207ENST00000555114 GTF2A2P52657 109 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 MAP3K9P80192 1104 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
NEDD1-207ENST00000555114 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 TEKT1Q969V4 418 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 GCC1Q96CN9 775 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 HOOK2Q96ED9 719 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
NEDD1-207ENST00000555114 MAST3O60307 1309 aa19.47■□□□□ 0.71
NEDD1-207ENST00000555114 RABL6Q3YEC7 729 aaPredicted RBP19.46■□□□□ 0.71
NEDD1-207ENST00000555114 FBXO33Q7Z6M2 555 aa19.46■□□□□ 0.71
NEDD1-207ENST00000555114 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
NEDD1-207ENST00000555114 TEPSINQ96N21 525 aa19.46■□□□□ 0.71
NEDD1-207ENST00000555114 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
NEDD1-207ENST00000555114 ZFYVE28Q9HCC9 887 aa19.46■□□□□ 0.71
NEDD1-207ENST00000555114 ARAP2Q8WZ64 1704 aa19.45■□□□□ 0.7
NEDD1-207ENST00000555114 VGLL4Q14135 290 aa19.45■□□□□ 0.7
NEDD1-207ENST00000555114 PTPN18Q99952 460 aa19.45■□□□□ 0.7
NEDD1-207ENST00000555114 PTPRCP08575 1304 aa19.45■□□□□ 0.7
NEDD1-207ENST00000555114 CCL15-CCL14A0A0B4J2E2 113 aa19.44■□□□□ 0.7
NEDD1-207ENST00000555114 PDE8BO95263 885 aa19.44■□□□□ 0.7
NEDD1-207ENST00000555114 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
NEDD1-207ENST00000555114 TAF1CQ15572 869 aaPredicted RBP19.44■□□□□ 0.7
NEDD1-207ENST00000555114 CCL15Q16663 113 aa19.44■□□□□ 0.7
NEDD1-207ENST00000555114 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
NEDD1-207ENST00000555114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEDD1-207ENST00000555114 MS4A4AQ96JQ5 239 aa19.44■□□□□ 0.7
NEDD1-207ENST00000555114 IQSEC3Q9UPP2 1182 aaPredicted RBP19.44■□□□□ 0.7
NEDD1-207ENST00000555114 SUGT1Q9Y2Z0 365 aa19.44■□□□□ 0.7
NEDD1-207ENST00000555114 IFIT1P09914 478 aaKnown RBP19.43■□□□□ 0.7
NEDD1-207ENST00000555114 LRRC24Q50LG9 513 aa19.43■□□□□ 0.7
NEDD1-207ENST00000555114 ARMC5Q96C12 935 aa19.43■□□□□ 0.7
NEDD1-207ENST00000555114 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
NEDD1-207ENST00000555114 MRIQ9BWK5 157 aa19.43■□□□□ 0.7
NEDD1-207ENST00000555114 PUM3Q15397 648 aaKnown RBP19.42■□□□□ 0.7
NEDD1-207ENST00000555114 NBPF11Q86T75 865 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 FAM83AQ86UY5 434 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 BRI3BPQ8WY22 251 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 ZDHHC15Q96MV8 337 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 TMEM106CQ9BVX2 250 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 OTOFQ9HC10 1997 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 KIF16BQ96L93 1317 aa19.42■□□□□ 0.7
NEDD1-207ENST00000555114 POTEFA5A3E0 1075 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
NEDD1-207ENST00000555114 CETPP11597 493 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 FKBP1CQ5VVH2 108 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 DCAF15Q66K64 600 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 CDAN1Q8IWY9 1227 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 MRPL50Q8N5N7 158 aaKnown RBP19.41■□□□□ 0.7
NEDD1-207ENST00000555114 ANKRD44Q8N8A2 993 aa19.41■□□□□ 0.7
NEDD1-207ENST00000555114 SPDYE5A6NIY4 337 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 BCAMP50895 628 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 KIF22Q14807 665 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 VGLL2Q8N8G2 317 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 WRNIP1Q96S55 665 aa19.4■□□□□ 0.7
NEDD1-207ENST00000555114 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
NEDD1-207ENST00000555114 SLC5A1P13866 664 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 CACNB3P54284 484 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 SNAPC2Q13487 334 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 GRIK5Q16478 980 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 SLC9C1Q4G0N8 1177 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 HHIPL2Q6UWX4 724 aa19.39■□□□□ 0.69
NEDD1-207ENST00000555114 E9PSI1 815 aa19.38■□□□□ 0.69
NEDD1-207ENST00000555114 FAM43AQ8N2R8 423 aa19.38■□□□□ 0.69
NEDD1-207ENST00000555114 WDR66Q8TBY9 1149 aa19.38■□□□□ 0.69
NEDD1-207ENST00000555114 RPAP1Q9BWH6 1393 aaPredicted RBP19.38■□□□□ 0.69
NEDD1-207ENST00000555114 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
NEDD1-207ENST00000555114 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
NEDD1-207ENST00000555114 LPIN2Q92539 896 aa19.37■□□□□ 0.69
NEDD1-207ENST00000555114 ZNF341Q9BYN7 854 aa19.37■□□□□ 0.69
NEDD1-207ENST00000555114 SNCAIPQ9Y6H5 919 aa19.37■□□□□ 0.69
NEDD1-207ENST00000555114 EYA2O00167 538 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 TLR2O60603 784 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 GNRH1P01148 92 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 PPIL2Q13356 520 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 APOBEC3HQ6NTF7 200 aaKnown RBP19.36■□□□□ 0.69
NEDD1-207ENST00000555114 ZNF333Q96JL9 665 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 USP44Q9H0E7 712 aa19.36■□□□□ 0.69
NEDD1-207ENST00000555114 RBBP6Q7Z6E9 1792 aaKnown RBP19.35■□□□□ 0.69
NEDD1-207ENST00000555114 FGFR2P21802 821 aa19.35■□□□□ 0.69
NEDD1-207ENST00000555114 SLC4A8Q2Y0W8 1093 aa19.35■□□□□ 0.69
NEDD1-207ENST00000555114 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
NEDD1-207ENST00000555114 GNL3LQ9NVN8 582 aaKnown RBP19.35■□□□□ 0.69
NEDD1-207ENST00000555114 PTCH2Q9Y6C5 1203 aa19.35■□□□□ 0.69
NEDD1-207ENST00000555114 IRF6O14896 467 aa19.34■□□□□ 0.69
NEDD1-207ENST00000555114 EN2P19622 333 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms