RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
TDP1-210ENST00000554976 TCEANC2Q96MN5 208 aa10.6□□□□□ -0.71
TDP1-210ENST00000554976 DENND2AQ9ULE3 1009 aa10.6□□□□□ -0.71
TDP1-210ENST00000554976 GSG1L2A8MUP6 293 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 IDH1O75874 414 aaKnown RBP10.59□□□□□ -0.71
TDP1-210ENST00000554976 HSP90AA1P07900 732 aaKnown RBP10.59□□□□□ -0.71
TDP1-210ENST00000554976 ST5P78524 1137 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 GPSM2P81274 684 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 WASHC4Q2M389 1173 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 Q6ZUG5 572 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 LCORLQ8N3X6 602 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 LEMD3Q9Y2U8 911 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 XDHP47989 1333 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 MAP3K12Q12852 859 aa10.59□□□□□ -0.71
TDP1-210ENST00000554976 NID2Q14112 1375 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 FBXO41Q8TF61 875 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 CTNNA3Q9UI47 895 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 PATL2C9JE40 543 aaKnown RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 CCDC83Q8IWF9 413 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 TDRD7Q8NHU6 1098 aaKnown RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 PFKFB2O60825 505 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 IGSF3O75054 1194 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 TMED8Q6PL24 325 aaPredicted RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 FLAD1Q8NFF5 587 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
TDP1-210ENST00000554976 NSUN4Q96CB9 384 aaKnown RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.58□□□□□ -0.72
TDP1-210ENST00000554976 MBD4O95243 580 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 CTDNEP1O95476 244 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 IFNL3Q8IZI9 196 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 NECAB1Q8N987 351 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 NEDD4P46934 1319 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 SRGNP10124 158 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 IL1R1P14778 569 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 HIBADHP31937 336 aaKnown RBP10.57□□□□□ -0.72
TDP1-210ENST00000554976 SCRN1Q12765 414 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 IMMTQ16891 758 aaKnown RBP10.57□□□□□ -0.72
TDP1-210ENST00000554976 BRIP1Q9BX63 1249 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 GNL3LQ9NVN8 582 aaKnown RBP10.57□□□□□ -0.72
TDP1-210ENST00000554976 TFCP2L1Q9NZI6 479 aa10.57□□□□□ -0.72
TDP1-210ENST00000554976 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
TDP1-210ENST00000554976 PRKAB2O43741 272 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 GJB2P29033 226 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 SIPA1L1O43166 1804 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 SCN9AQ15858 1988 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 BBOX1O75936 387 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 GNAT2P19087 354 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 SYT1P21579 422 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 CYB5R4Q7L1T6 521 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 CHAMP1Q96JM3 812 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 MTMR6Q9Y217 621 aa10.56□□□□□ -0.72
TDP1-210ENST00000554976 FGRP09769 529 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 EZH2Q15910 746 aaKnown RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 AIDAQ96BJ3 306 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 POLLQ9UGP5 575 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 MYH1P12882 1939 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 C10orf71Q711Q0 1435 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 MECOMQ03112 1051 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 SP8Q8IXZ3 490 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 TMEM87AQ8NBN3 555 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 STAG1Q8WVM7 1258 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 GREB1LQ9C091 1923 aaPredicted RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 ZNF213O14771 459 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 ZSCAN22P10073 491 aaPredicted RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 PDIA3P30101 505 aaKnown RBP10.55□□□□□ -0.72
TDP1-210ENST00000554976 HAND2P61296 217 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 BRF1Q92994 677 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 LRRC2Q9BYS8 371 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
TDP1-210ENST00000554976 TRAK2O60296 914 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 GRIK5Q16478 980 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 NCOA7Q8NI08 942 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 TBC1D16Q8TBP0 767 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 LLPHQ9BRT6 129 aaKnown RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 ZMYND15Q9H091 742 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 GPHNQ9NQX3 736 aaPredicted RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 STX6O43752 255 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 CYP7A1P22680 504 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 PRDX5P30044 214 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 APOBRQ0VD83 1088 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
TDP1-210ENST00000554976 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms