RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
CCDC85C-202ENST00000554877 TBC1D22AQ8WUA7 517 aa15.32■□□□□ 0.04
CCDC85C-202ENST00000554877 LPIN2Q92539 896 aa15.32■□□□□ 0.04
CCDC85C-202ENST00000554877 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CCDC85C-202ENST00000554877 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
CCDC85C-202ENST00000554877 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
CCDC85C-202ENST00000554877 GNAI3P08754 354 aa15.31■□□□□ 0.04
CCDC85C-202ENST00000554877 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
CCDC85C-202ENST00000554877 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
CCDC85C-202ENST00000554877 CASP8AP2Q9UKL3 1982 aa15.31■□□□□ 0.04
CCDC85C-202ENST00000554877 TRIM27P14373 513 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 IREB2P48200 963 aaKnown RBP15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 TNNI2P48788 182 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 TIMM10P62072 90 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 TMEM39BQ9GZU3 492 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 PPP2R3BQ9Y5P8 575 aa15.3■□□□□ 0.04
CCDC85C-202ENST00000554877 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 THSD7BQ9C0I4 1608 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 USP2O75604 605 aaPredicted RBP15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 ADORA1P30542 326 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 IL15P40933 162 aaPredicted RBP15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 LDLRAD1Q5T700 205 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 CDAN1Q8IWY9 1227 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 SAGE1Q9NXZ1 904 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
CCDC85C-202ENST00000554877 CIAO1O76071 339 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 PHKA1P46020 1223 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 TFCP2Q12800 502 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 ZKSCAN2Q63HK3 967 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
CCDC85C-202ENST00000554877 GNAI2P04899 355 aa15.27■□□□□ 0.04
CCDC85C-202ENST00000554877 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
CCDC85C-202ENST00000554877 TMEM57Q8N5G2 664 aa15.27■□□□□ 0.04
CCDC85C-202ENST00000554877 LDHBP07195 334 aaKnown RBP15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 TM4SF4P48230 202 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 DIXDC1Q155Q3 683 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
CCDC85C-202ENST00000554877 MAST3O60307 1309 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 RLBP1P12271 317 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 PRDX5P30044 214 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 HDLBPQ00341 1268 aaKnown RBP15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 TCP10Q12799 353 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 APOBEC3HQ6NTF7 200 aaKnown RBP15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 FTSJ3Q8IY81 847 aaKnown RBP15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 ANKRD13AQ8IZ07 590 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 ZDHHC15Q96MV8 337 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 ABCF2Q9UG63 623 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
CCDC85C-202ENST00000554877 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 MIGA2Q7L4E1 593 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 COL1A1P02452 1464 aaPredicted RBP15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 SSC5DA1L4H1 1573 aa15.24■□□□□ 0.03
CCDC85C-202ENST00000554877 PNMA6EA0A0J9YXQ4 647 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 GPR25O00155 361 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 GJA5P36382 358 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 MAP3K9P80192 1104 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 HHIPL2Q6UWX4 724 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 MRIQ9BWK5 157 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 SUGT1Q9Y2Z0 365 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 CSADQ9Y600 493 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 AKAP11Q9UKA4 1901 aa15.23■□□□□ 0.03
CCDC85C-202ENST00000554877 CDC42EP5Q6NZY7 148 aa15.22■□□□□ 0.03
CCDC85C-202ENST00000554877 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
CCDC85C-202ENST00000554877 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
CCDC85C-202ENST00000554877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
CCDC85C-202ENST00000554877 FKTNO75072 461 aa15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 INHBEP58166 350 aa15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 DZIP1Q86YF9 867 aaKnown RBP15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 ZKSCAN4Q969J2 545 aaPredicted RBP15.21■□□□□ 0.03
CCDC85C-202ENST00000554877 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms