RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 USP8P40818 1118 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 DDX11Q96FC9 970 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 FAN1Q9Y2M0 1017 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 ESCO1Q5FWF5 840 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 XPO4Q9C0E2 1151 aaKnown RBP18■□□□□ 0.47
SYNE3-203ENST00000554873 MNAT1P51948 309 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 MCM6Q14566 821 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 BRF1Q92994 677 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 NEK1Q96PY6 1258 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 MRFAP1Q9Y605 127 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 NCAPD2Q15021 1401 aa18■□□□□ 0.47
SYNE3-203ENST00000554873 CHGBP05060 677 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 RESTQ13127 1097 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 GCP02774 474 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 GCKRQ14397 625 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 KRT32Q14532 448 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 Q6ZUG5 572 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
SYNE3-203ENST00000554873 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
SYNE3-203ENST00000554873 ZSCAN12O43309 604 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 MYL6BP14649 208 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 BEND6Q5SZJ8 279 aaPredicted RBP17.98■□□□□ 0.47
SYNE3-203ENST00000554873 FCHSD1Q86WN1 690 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 ERLIN2O94905 339 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 ATP5JP18859 108 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 SLC39A6Q13433 755 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 FAM71BQ8TC56 605 aa17.98■□□□□ 0.47
SYNE3-203ENST00000554873 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 CNNM3Q8NE01 707 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 SEC62Q99442 399 aaKnown RBP17.97■□□□□ 0.47
SYNE3-203ENST00000554873 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 MYD88Q99836 296 aa17.97■□□□□ 0.47
SYNE3-203ENST00000554873 TACO1Q9BSH4 297 aaKnown RBP17.97■□□□□ 0.47
SYNE3-203ENST00000554873 H3BQV1 296 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 N4BP1O75113 896 aaKnown RBP17.96■□□□□ 0.47
SYNE3-203ENST00000554873 IFFO2Q5TF58 517 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 FAM212AQ96EL1 285 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 CYP21A2P08686 494 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 HNRNPH1P31943 449 aaKnown RBP17.96■□□□□ 0.47
SYNE3-203ENST00000554873 USP5P45974 858 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 TFCP2Q12800 502 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 HSP90B2PQ58FF3 399 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
SYNE3-203ENST00000554873 KAT2BQ92831 832 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
SYNE3-203ENST00000554873 A0A087WWV3 80 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 VWA3AA6NCI4 1184 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 KINO60870 393 aaKnown RBP17.95■□□□□ 0.46
SYNE3-203ENST00000554873 ERLIN1O75477 346 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
SYNE3-203ENST00000554873 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 FPGT-TNNI3KV9GXZ4 949 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 RFX5P48382 616 aaPredicted RBP17.95■□□□□ 0.46
SYNE3-203ENST00000554873 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
SYNE3-203ENST00000554873 CCDC73Q6ZRK6 1079 aa17.95■□□□□ 0.46
SYNE3-203ENST00000554873 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
SYNE3-203ENST00000554873 GOLGA6L9A6NEM1 432 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 PPP1R12AO14974 1030 aaPredicted RBP17.94■□□□□ 0.46
SYNE3-203ENST00000554873 PTPN12Q05209 780 aaKnown RBP17.94■□□□□ 0.46
SYNE3-203ENST00000554873 SCRN1Q12765 414 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 RAI14Q9P0K7 980 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 L1RE1Q9UN81 338 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
SYNE3-203ENST00000554873 MRC1P22897 1456 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
SYNE3-203ENST00000554873 GNG11P61952 73 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 LRCH2Q5VUJ6 765 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 TTLL5Q6EMB2 1281 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 BPIFA3Q9BQP9 254 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 ZNF609O15014 1411 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
SYNE3-203ENST00000554873 RAB21Q9UL25 225 aa17.94■□□□□ 0.46
SYNE3-203ENST00000554873 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 WDR24Q96S15 920 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
SYNE3-203ENST00000554873 DBNDD2Q9BQY9 259 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 GOLPH3LQ9H4A5 285 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 PLEKHA4Q9H4M7 779 aa17.93■□□□□ 0.46
SYNE3-203ENST00000554873 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
SYNE3-203ENST00000554873 C21orf2O43822 256 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 STAG1Q8WVM7 1258 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms