RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ARMT1Q9H993 441 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.21
XRCC3-208ENST00000554811 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 ZBTB43O43298 467 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 ERCC6LQ2NKX8 1250 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 MAGEB6Q8N7X4 407 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
XRCC3-208ENST00000554811 ERICH2A1L162 156 aa13.71□□□□□ -0.22
XRCC3-208ENST00000554811 PRDM1O75626 825 aa13.71□□□□□ -0.22
XRCC3-208ENST00000554811 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.22
XRCC3-208ENST00000554811 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.22
XRCC3-208ENST00000554811 KCNB2Q92953 911 aa13.71□□□□□ -0.22
XRCC3-208ENST00000554811 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
XRCC3-208ENST00000554811 PHKA1P46020 1223 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 IQCB1Q15051 598 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 KRT40Q6A162 431 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 CGNQ9P2M7 1197 aaKnown RBP13.7□□□□□ -0.22
XRCC3-208ENST00000554811 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 KARSQ15046 597 aaKnown RBP13.7□□□□□ -0.22
XRCC3-208ENST00000554811 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
XRCC3-208ENST00000554811 MBD4O95243 580 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 FBXO18Q8NFZ0 1043 aa13.7□□□□□ -0.22
XRCC3-208ENST00000554811 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 DHX40Q8IX18 779 aaKnown RBP13.69□□□□□ -0.22
XRCC3-208ENST00000554811 LINC00301Q8NCQ3 95 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 APPBP2Q92624 585 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 ACSBG1Q96GR2 724 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-208ENST00000554811 FANCCQ00597 558 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 HLFQ16534 295 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 TEX35Q5T0J7 233 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-208ENST00000554811 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 FOXN1O15353 648 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 ST7Q9NRC1 585 aa13.69□□□□□ -0.22
XRCC3-208ENST00000554811 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
XRCC3-208ENST00000554811 H7C1W4 665 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 KDM6AO15550 1401 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-208ENST00000554811 PRKAB2O43741 272 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 ADALQ6DHV7 355 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 RANBP6O60518 1105 aaKnown RBP13.68□□□□□ -0.22
XRCC3-208ENST00000554811 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 SH3TC1Q8TE82 1336 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 BTBD18B2RXH4 712 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 STARD3NLO95772 234 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 MCAMP43121 646 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-208ENST00000554811 TBC1D10CQ8IV04 446 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 UBXN4Q92575 508 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 DESI2Q9BSY9 194 aa13.68□□□□□ -0.22
XRCC3-208ENST00000554811 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
XRCC3-208ENST00000554811 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 RABL6Q3YEC7 729 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 TRIM22Q8IYM9 498 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 ZNF274Q96GC6 653 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 UTYO14607 1347 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 MEGF6O75095 1541 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 IL2RBP14784 551 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 CASP1P29466 404 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 GNG11P61952 73 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 CYB5R4Q7L1T6 521 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 UBAC1Q9BSL1 405 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
XRCC3-208ENST00000554811 FMR1NBQ8N0W7 255 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
XRCC3-208ENST00000554811 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
XRCC3-208ENST00000554811 SLU7O95391 586 aaKnown RBP13.66□□□□□ -0.22
XRCC3-208ENST00000554811 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 DPF2Q92785 391 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 DHX58Q96C10 678 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 IL17RAQ96F46 866 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 CDC27P30260 824 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
XRCC3-208ENST00000554811 CDKL5O76039 1030 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms