RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 METTL24Q5JXM2 366 aa15.71■□□□□ 0.11
RDH11-207ENST00000554731 FBXO33Q7Z6M2 555 aa15.71■□□□□ 0.11
RDH11-207ENST00000554731 OPTNQ96CV9 577 aa15.71■□□□□ 0.11
RDH11-207ENST00000554731 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
RDH11-207ENST00000554731 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
RDH11-207ENST00000554731 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
RDH11-207ENST00000554731 INTS3Q68E01 1043 aaKnown RBP15.7■□□□□ 0.1
RDH11-207ENST00000554731 TBC1D22AQ8WUA7 517 aa15.7■□□□□ 0.1
RDH11-207ENST00000554731 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
RDH11-207ENST00000554731 PTPN18Q99952 460 aa15.7■□□□□ 0.1
RDH11-207ENST00000554731 TMEM39BQ9GZU3 492 aa15.7■□□□□ 0.1
RDH11-207ENST00000554731 IQSEC3Q9UPP2 1182 aaPredicted RBP15.7■□□□□ 0.1
RDH11-207ENST00000554731 HDLBPQ00341 1268 aaKnown RBP15.69■□□□□ 0.1
RDH11-207ENST00000554731 LRRC24Q50LG9 513 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.69■□□□□ 0.1
RDH11-207ENST00000554731 CDAN1Q8IWY9 1227 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 ANKRD44Q8N8A2 993 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 CD99L2Q8TCZ2 262 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 PCDH10Q9P2E7 1040 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 LAMB1P07942 1786 aa15.69■□□□□ 0.1
RDH11-207ENST00000554731 MAP3K9P80192 1104 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 SP3Q02447 781 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 VGLL4Q14135 290 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 GRIK5Q16478 980 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
RDH11-207ENST00000554731 TEKT1Q969V4 418 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 MS4A4AQ96JQ5 239 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 CSADQ9Y600 493 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 ARAP2Q8WZ64 1704 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 PTPRCP08575 1304 aa15.68■□□□□ 0.1
RDH11-207ENST00000554731 KIAA0100Q14667 2235 aaKnown RBP15.67■□□□□ 0.1
RDH11-207ENST00000554731 PDE8BO95263 885 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
RDH11-207ENST00000554731 GTF2A2P52657 109 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 VGLL2Q8N8G2 317 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.67■□□□□ 0.1
RDH11-207ENST00000554731 BRI3BPQ8WY22 251 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 ZNF521Q96K83 1311 aa15.67■□□□□ 0.1
RDH11-207ENST00000554731 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 BCAMP50895 628 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 CCL15Q16663 113 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 MAST3O60307 1309 aa15.66■□□□□ 0.1
RDH11-207ENST00000554731 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 IFIT1P09914 478 aaKnown RBP15.65■□□□□ 0.1
RDH11-207ENST00000554731 CACNB3P54284 484 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 ARHGEF6Q15052 776 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 PUM3Q15397 648 aaKnown RBP15.65■□□□□ 0.1
RDH11-207ENST00000554731 TAF1CQ15572 869 aaPredicted RBP15.65■□□□□ 0.1
RDH11-207ENST00000554731 KLHDC4Q8TBB5 520 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 OTUD5Q96G74 571 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 ZDHHC15Q96MV8 337 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 KIF16BQ96L93 1317 aa15.65■□□□□ 0.1
RDH11-207ENST00000554731 WDHD1O75717 1129 aaPredicted RBP15.64■□□□□ 0.09
RDH11-207ENST00000554731 FKBP1CQ5VVH2 108 aa15.64■□□□□ 0.09
RDH11-207ENST00000554731 FAM83AQ86UY5 434 aa15.64■□□□□ 0.09
RDH11-207ENST00000554731 ARMC5Q96C12 935 aa15.64■□□□□ 0.09
RDH11-207ENST00000554731 USP44Q9H0E7 712 aa15.64■□□□□ 0.09
RDH11-207ENST00000554731 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 E9PSI1 815 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 FGFR2P21802 821 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 APOBEC3HQ6NTF7 200 aaKnown RBP15.63■□□□□ 0.09
RDH11-207ENST00000554731 HHIPL2Q6UWX4 724 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 ERO1BQ86YB8 467 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 FAM43AQ8N2R8 423 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 SSH1Q8WYL5 1049 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 WRNIP1Q96S55 665 aa15.63■□□□□ 0.09
RDH11-207ENST00000554731 EYA2O00167 538 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 CETPP11597 493 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 SLC5A1P13866 664 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 CAP1Q01518 475 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 DCAF15Q66K64 600 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 GCC1Q96CN9 775 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
RDH11-207ENST00000554731 HTTP42858 3142 aa15.61■□□□□ 0.09
RDH11-207ENST00000554731 SNAPC2Q13487 334 aa15.61■□□□□ 0.09
RDH11-207ENST00000554731 WDR66Q8TBY9 1149 aa15.61■□□□□ 0.09
RDH11-207ENST00000554731 LPIN2Q92539 896 aa15.61■□□□□ 0.09
RDH11-207ENST00000554731 ZKSCAN4Q969J2 545 aaPredicted RBP15.61■□□□□ 0.09
RDH11-207ENST00000554731 TMEM106CQ9BVX2 250 aa15.61■□□□□ 0.09
RDH11-207ENST00000554731 ZCCHC17Q9NP64 241 aaKnown RBP15.61■□□□□ 0.09
RDH11-207ENST00000554731 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
RDH11-207ENST00000554731 RFX5P48382 616 aaPredicted RBP15.6■□□□□ 0.09
RDH11-207ENST00000554731 PPIL2Q13356 520 aa15.6■□□□□ 0.09
RDH11-207ENST00000554731 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
RDH11-207ENST00000554731 NBPF11Q86T75 865 aa15.6■□□□□ 0.09
RDH11-207ENST00000554731 PTCH2Q9Y6C5 1203 aa15.6■□□□□ 0.09
RDH11-207ENST00000554731 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
RDH11-207ENST00000554731 IRF6O14896 467 aa15.59■□□□□ 0.09
RDH11-207ENST00000554731 TLR2O60603 784 aa15.59■□□□□ 0.09
RDH11-207ENST00000554731 EN2P19622 333 aaPredicted RBP15.59■□□□□ 0.09
RDH11-207ENST00000554731 KIF22Q14807 665 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms