RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PRMT6Q96LA8 375 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-214ENST00000554604 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
SHMT2-214ENST00000554604 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
SHMT2-214ENST00000554604 COPRSQ9NQ92 184 aa15.36■□□□□ 0.05
SHMT2-214ENST00000554604 SERPINA10Q9UK55 444 aa15.36■□□□□ 0.05
SHMT2-214ENST00000554604 PCDHAC2Q9Y5I4 1007 aa15.36■□□□□ 0.05
SHMT2-214ENST00000554604 COL1A1P02452 1464 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-214ENST00000554604 CA12O43570 354 aa15.35■□□□□ 0.05
SHMT2-214ENST00000554604 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
SHMT2-214ENST00000554604 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
SHMT2-214ENST00000554604 GNL3LQ9NVN8 582 aaKnown RBP15.35■□□□□ 0.05
SHMT2-214ENST00000554604 CASP8AP2Q9UKL3 1982 aa15.35■□□□□ 0.05
SHMT2-214ENST00000554604 FAM155AB1AL88 458 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-214ENST00000554604 UBE2Q2LH0YL09 131 aa15.34■□□□□ 0.05
SHMT2-214ENST00000554604 HSPA8P11142 646 aaKnown RBP15.34■□□□□ 0.05
SHMT2-214ENST00000554604 MTX1Q13505 466 aa15.34■□□□□ 0.05
SHMT2-214ENST00000554604 PRKG1Q13976 671 aa15.34■□□□□ 0.05
SHMT2-214ENST00000554604 MOB2Q70IA6 237 aa15.34■□□□□ 0.05
SHMT2-214ENST00000554604 ARMC9Q7Z3E5 817 aa15.34■□□□□ 0.05
SHMT2-214ENST00000554604 SLC10A3P09131 477 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 CRKP46108 304 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 TNFAIP1Q13829 316 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 DZIP1LQ8IYY4 767 aaKnown RBP15.33■□□□□ 0.04
SHMT2-214ENST00000554604 WDR66Q8TBY9 1149 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 ZIC5Q96T25 663 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 COG6Q9Y2V7 657 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 PPP2R3BQ9Y5P8 575 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 MAST3O60307 1309 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 AK9Q5TCS8 1911 aa15.33■□□□□ 0.04
SHMT2-214ENST00000554604 HDLBPQ00341 1268 aaKnown RBP15.32■□□□□ 0.04
SHMT2-214ENST00000554604 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-214ENST00000554604 GRIK5Q16478 980 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 TEKT1Q969V4 418 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
SHMT2-214ENST00000554604 SUGT1Q9Y2Z0 365 aa15.32■□□□□ 0.04
SHMT2-214ENST00000554604 PPP1R12BO60237 982 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-214ENST00000554604 RLBP1P12271 317 aa15.31■□□□□ 0.04
SHMT2-214ENST00000554604 RASA3Q14644 834 aa15.31■□□□□ 0.04
SHMT2-214ENST00000554604 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
SHMT2-214ENST00000554604 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
SHMT2-214ENST00000554604 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-214ENST00000554604 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
SHMT2-214ENST00000554604 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
SHMT2-214ENST00000554604 AOX1Q06278 1338 aa15.31■□□□□ 0.04
SHMT2-214ENST00000554604 TNNI2P48788 182 aa15.3■□□□□ 0.04
SHMT2-214ENST00000554604 TFCP2Q12800 502 aa15.3■□□□□ 0.04
SHMT2-214ENST00000554604 G3BP1Q13283 466 aaKnown RBP eCLIP15.3■□□□□ 0.048e-8■■■□□ 16.6
SHMT2-214ENST00000554604 MYH2Q9UKX2 1941 aa15.3■□□□□ 0.04
SHMT2-214ENST00000554604 PNMA6EA0A0J9YXQ4 647 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 SEMA3EO15041 775 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 ADORA1P30542 326 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 PHKA1P46020 1223 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 TIMM10P62072 90 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-214ENST00000554604 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-214ENST00000554604 MRIQ9BWK5 157 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-214ENST00000554604 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
SHMT2-214ENST00000554604 A0A1B0GUL7 405 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 CAPN15O75808 1086 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 LDHBP07195 334 aaKnown RBP15.28■□□□□ 0.04
SHMT2-214ENST00000554604 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 CCDC102BQ68D86 513 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 NEUROD6Q96NK8 337 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 CSRNP1Q96S65 589 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
SHMT2-214ENST00000554604 TRPA1O75762 1119 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 IREB2P48200 963 aaKnown RBP15.27■□□□□ 0.04
SHMT2-214ENST00000554604 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
SHMT2-214ENST00000554604 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-214ENST00000554604 HHIPL2Q6UWX4 724 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 SLC10A4Q96EP9 437 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 XAGE2Q96GT9 111 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 C1orf115Q9H7X2 142 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 DDX19BQ9UMR2 479 aa15.27■□□□□ 0.04
SHMT2-214ENST00000554604 ATP8B2P98198 1209 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
SHMT2-214ENST00000554604 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 RNF186Q9NXI6 227 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 SAGE1Q9NXZ1 904 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 SSC5DA1L4H1 1573 aa15.26■□□□□ 0.03
SHMT2-214ENST00000554604 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-214ENST00000554604 PRDX5P30044 214 aa15.25■□□□□ 0.03
SHMT2-214ENST00000554604 CACNB3P54284 484 aa15.25■□□□□ 0.03
SHMT2-214ENST00000554604 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
SHMT2-214ENST00000554604 MAP3K11Q16584 847 aa15.25■□□□□ 0.03
SHMT2-214ENST00000554604 APOBEC3HQ6NTF7 200 aaKnown RBP15.25■□□□□ 0.03
SHMT2-214ENST00000554604 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
SHMT2-214ENST00000554604 SALL1Q9NSC2 1324 aa15.24■□□□□ 0.03
SHMT2-214ENST00000554604 UNCXA6NJT0 531 aa15.24■□□□□ 0.03
SHMT2-214ENST00000554604 SURF6O75683 361 aaKnown RBP15.24■□□□□ 0.03
SHMT2-214ENST00000554604 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms