RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 MAST3O60307 1309 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 SURF6O75683 361 aaKnown RBP13.17□□□□□ -0.3
SHMT2-213ENST00000554600 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-213ENST00000554600 PRKG1Q13976 671 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-213ENST00000554600 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-213ENST00000554600 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 CASP8AP2Q9UKL3 1982 aa13.17□□□□□ -0.3
SHMT2-213ENST00000554600 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-213ENST00000554600 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-213ENST00000554600 POLA2Q14181 598 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
SHMT2-213ENST00000554600 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 DEFB129Q9H1M3 183 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
SHMT2-213ENST00000554600 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-213ENST00000554600 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
SHMT2-213ENST00000554600 AOX1Q06278 1338 aa13.15□□□□□ -0.3
SHMT2-213ENST00000554600 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
SHMT2-213ENST00000554600 SEMA3EO15041 775 aa13.15□□□□□ -0.3
SHMT2-213ENST00000554600 FKBP1BP68106 108 aa13.15□□□□□ -0.3
SHMT2-213ENST00000554600 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
SHMT2-213ENST00000554600 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 FOXN1O15353 648 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
SHMT2-213ENST00000554600 MAP2K2P36507 400 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
SHMT2-213ENST00000554600 NOGQ13253 232 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 TNFAIP1Q13829 316 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 CEP85Q6P2H3 762 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
SHMT2-213ENST00000554600 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 ANGEL1Q9UNK9 670 aaKnown RBP13.14□□□□□ -0.31
SHMT2-213ENST00000554600 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
SHMT2-213ENST00000554600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-213ENST00000554600 PRDX5P30044 214 aa13.13□□□□□ -0.31
SHMT2-213ENST00000554600 TNNI2P48788 182 aa13.13□□□□□ -0.31
SHMT2-213ENST00000554600 RASGRF1Q13972 1273 aa13.13□□□□□ -0.31
SHMT2-213ENST00000554600 RASA3Q14644 834 aa13.13□□□□□ -0.31
SHMT2-213ENST00000554600 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
SHMT2-213ENST00000554600 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
SHMT2-213ENST00000554600 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-213ENST00000554600 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-213ENST00000554600 CACNB3P54284 484 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-213ENST00000554600 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 DZIP1Q86YF9 867 aaKnown RBP13.12□□□□□ -0.31
SHMT2-213ENST00000554600 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
SHMT2-213ENST00000554600 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
SHMT2-213ENST00000554600 APBB1O00213 710 aa13.11□□□□□ -0.31
SHMT2-213ENST00000554600 HMMRO75330 724 aa13.11□□□□□ -0.31
SHMT2-213ENST00000554600 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-213ENST00000554600 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
SHMT2-213ENST00000554600 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-213ENST00000554600 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
SHMT2-213ENST00000554600 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-213ENST00000554600 SLC10A3P09131 477 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 UQCRFS1P1P0C7P4 283 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 LBX1P52954 281 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
SHMT2-213ENST00000554600 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-213ENST00000554600 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 TMEM39BQ9GZU3 492 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
SHMT2-213ENST00000554600 DAGLAQ9Y4D2 1042 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms