RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 POLIQ9UNA4 740 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-227ENST00000554491 IRAK1P51617 712 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 C19orf57Q0VDD7 668 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 FDX2Q6P4F2 183 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 TTC16Q8NEE8 873 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 GOLGA2P5Q9HBQ8 144 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 ABCA10Q8WWZ4 1543 aa6.7□□□□□ -1.34
ATXN3-227ENST00000554491 TNFRSF21O75509 655 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 DLGAP3O95886 979 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 GRIK1P39086 918 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 SGO2Q562F6 1265 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
ATXN3-227ENST00000554491 DTX1Q86Y01 620 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 BSNDQ8WZ55 320 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 LATS2Q9NRM7 1088 aa6.69□□□□□ -1.34
ATXN3-227ENST00000554491 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-227ENST00000554491 PRG4Q92954 1404 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-227ENST00000554491 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 TMEM88BA6NKF7 163 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 WDR64B1ANS9 1081 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 PHACTR2O75167 634 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 TAL1P17542 331 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-227ENST00000554491 SSFA2P28290 1259 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 HOXA10P31260 410 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-227ENST00000554491 IKBKEQ14164 716 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 PMEPA1Q969W9 287 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
ATXN3-227ENST00000554491 GLI2P10070 1586 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 LOC100289279A0A1B0GTE1 492 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 PAX4O43316 350 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 GAS2O43903 313 aaKnown RBP6.67□□□□□ -1.34
ATXN3-227ENST00000554491 MAP4P27816 1152 aaKnown RBP6.67□□□□□ -1.34
ATXN3-227ENST00000554491 ARL4DP49703 201 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 PEAR1Q5VY43 1037 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-227ENST00000554491 NUTM2GQ5VZR2 741 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 C12orf50Q8NA57 414 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-227ENST00000554491 ASAP3Q8TDY4 903 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 TMPRSS13Q9BYE2 586 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
ATXN3-227ENST00000554491 KIF21BO75037 1637 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 MAP3K4Q9Y6R4 1608 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 CARNS1A5YM72 827 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 METTL12A8MUP2 240 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 TIAF1O95411 115 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 EDN3P14138 238 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 DRD2P14416 443 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 AAMPQ13685 434 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 FBXL6Q8N531 539 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 SNX29Q8TEQ0 813 aa6.66□□□□□ -1.34
ATXN3-227ENST00000554491 FZD6O60353 706 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 NPR3P17342 541 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 RXRBP28702 533 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 PHLDB3Q6NSJ2 640 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
ATXN3-227ENST00000554491 BHLHE41Q9C0J9 482 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-227ENST00000554491 CCDC87Q9NVE4 849 aa6.65□□□□□ -1.34
ATXN3-227ENST00000554491 CUL7Q14999 1698 aa6.65□□□□□ -1.35
ATXN3-227ENST00000554491 WNT11O96014 354 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 F13BP05160 661 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 POLR3DP05423 398 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-227ENST00000554491 ESRRAP11474 423 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-227ENST00000554491 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 SUGCTQ9HAC7 445 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 ANO2Q9NQ90 1003 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 FHAD1B1AJZ9 1412 aa6.64□□□□□ -1.35
ATXN3-227ENST00000554491 PCF11O94913 1555 aaKnown RBP6.64□□□□□ -1.35
ATXN3-227ENST00000554491 FAM13AO94988 1023 aa6.63□□□□□ -1.35
ATXN3-227ENST00000554491 GSTM4Q03013 218 aa6.63□□□□□ -1.35
ATXN3-227ENST00000554491 CCDC82Q8N4S0 544 aa6.63□□□□□ -1.35
ATXN3-227ENST00000554491 FBLIM1Q8WUP2 373 aa6.63□□□□□ -1.35
ATXN3-227ENST00000554491 SOX17Q9H6I2 414 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-227ENST00000554491 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
ATXN3-227ENST00000554491 ERICH3Q5RHP9 1530 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 FAM95CA0A1B0GW59 222 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 ZNF211Q13398 564 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-227ENST00000554491 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 GJD3Q8N144 294 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 UBE2Q2Q8WVN8 375 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 NRSN2Q9GZP1 204 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 ZFYVE28Q9HCC9 887 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 CYP4F12Q9HCS2 524 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 ATG3Q9NT62 314 aa6.62□□□□□ -1.35
ATXN3-227ENST00000554491 TEX14Q8IWB6 1497 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 ABL1P00519 1130 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 ADMP35318 185 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 USP5P45974 858 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 USP11P51784 963 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 EHHADHQ08426 723 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-227ENST00000554491 ADGRE2Q9UHX3 823 aa6.61□□□□□ -1.35
ATXN3-227ENST00000554491 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms