RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TM4SF5O14894 197 aa8.64□□□□□ -1.03
SCFD1-211ENST00000554437 SELPP16109 830 aa8.64□□□□□ -1.03
SCFD1-211ENST00000554437 TPTE2Q6XPS3 522 aa8.64□□□□□ -1.03
SCFD1-211ENST00000554437 USP21Q9UK80 565 aa8.64□□□□□ -1.03
SCFD1-211ENST00000554437 PPM1HQ9ULR3 514 aa8.64□□□□□ -1.03
SCFD1-211ENST00000554437 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
SCFD1-211ENST00000554437 C9orf172C9J069 976 aa8.63□□□□□ -1.03
SCFD1-211ENST00000554437 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-211ENST00000554437 FBXO24O75426 580 aa8.63□□□□□ -1.03
SCFD1-211ENST00000554437 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
SCFD1-211ENST00000554437 Q8N3U1 123 aa8.63□□□□□ -1.03
SCFD1-211ENST00000554437 TMEM39AQ9NV64 488 aa8.63□□□□□ -1.03
SCFD1-211ENST00000554437 ADAM11O75078 769 aa8.62□□□□□ -1.03
SCFD1-211ENST00000554437 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
SCFD1-211ENST00000554437 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-211ENST00000554437 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
SCFD1-211ENST00000554437 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
SCFD1-211ENST00000554437 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
SCFD1-211ENST00000554437 CTSHP09668 335 aa8.61□□□□□ -1.03
SCFD1-211ENST00000554437 NRG1Q02297 640 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-211ENST00000554437 MEI1Q5TIA1 1274 aa8.61□□□□□ -1.03
SCFD1-211ENST00000554437 UBASH3BQ8TF42 649 aa8.61□□□□□ -1.03
SCFD1-211ENST00000554437 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
SCFD1-211ENST00000554437 C1QTNF9BB2RNN3 333 aa8.6□□□□□ -1.03
SCFD1-211ENST00000554437 WISP1O95388 367 aa8.6□□□□□ -1.03
SCFD1-211ENST00000554437 PROCP04070 461 aa8.6□□□□□ -1.03
SCFD1-211ENST00000554437 CYP11A1P05108 521 aa8.6□□□□□ -1.03
SCFD1-211ENST00000554437 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
SCFD1-211ENST00000554437 ACAD11Q709F0 780 aa8.6□□□□□ -1.03
SCFD1-211ENST00000554437 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-211ENST00000554437 MAOBP27338 520 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 CHRNA4P43681 627 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 AP3B2Q13367 1082 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 POU4F3Q15319 338 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-211ENST00000554437 CD163Q86VB7 1156 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 ANKRD24Q8TF21 1146 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
SCFD1-211ENST00000554437 TRIM56Q9BRZ2 755 aaKnown RBP8.59□□□□□ -1.03
SCFD1-211ENST00000554437 ENC1O14682 589 aa8.58□□□□□ -1.04
SCFD1-211ENST00000554437 CCDC85BQ15834 202 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-211ENST00000554437 LOC100289279A0A1B0GTE1 492 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-211ENST00000554437 ALX3O95076 343 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 CELA3AP09093 270 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 ADGRE1Q14246 886 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 MBTPS1Q14703 1052 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 KIAA1211Q6ZU35 1233 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 SV2BQ7L1I2 683 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.57□□□□□ -1.04
SCFD1-211ENST00000554437 SULF2Q8IWU5 870 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
SCFD1-211ENST00000554437 TMEM130Q8N3G9 435 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 MRRFQ96E11 262 aaKnown RBP8.57□□□□□ -1.04
SCFD1-211ENST00000554437 RUSC1Q9BVN2 902 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 NRSN2Q9GZP1 204 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 AKTIPQ9H8T0 292 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 SAMM50Q9Y512 469 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
SCFD1-211ENST00000554437 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 K7ELQ4 463 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-211ENST00000554437 PAGE1O75459 146 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 NME2P22392 152 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 IREB2P48200 963 aaKnown RBP8.56□□□□□ -1.04
SCFD1-211ENST00000554437 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
SCFD1-211ENST00000554437 WFDC12Q8WWY7 111 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 ZNF428Q96B54 188 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 ZC3H12CQ9C0D7 883 aaKnown RBP8.56□□□□□ -1.04
SCFD1-211ENST00000554437 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
SCFD1-211ENST00000554437 ECEL1O95672 775 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 GSTP1P09211 210 aaKnown RBP8.55□□□□□ -1.04
SCFD1-211ENST00000554437 ARNTP27540 789 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
SCFD1-211ENST00000554437 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 TSNAXIP1Q2TAA8 658 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 TMEM87AQ8NBN3 555 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 STK35Q8TDR2 534 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 BACH2Q9BYV9 841 aa8.55□□□□□ -1.04
SCFD1-211ENST00000554437 DLGAP3O95886 979 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 CTSBP07858 339 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 NOS3P29474 1203 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 GATA4P43694 442 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 MAP3K11Q16584 847 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 EXOSC6Q5RKV6 272 aaKnown RBP8.54□□□□□ -1.04
SCFD1-211ENST00000554437 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-211ENST00000554437 KCNB2Q92953 911 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 EMILIN2Q9BXX0 1053 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 RNF208Q9H0X6 261 aa8.54□□□□□ -1.04
SCFD1-211ENST00000554437 GLB1P16278 677 aa8.53□□□□□ -1.04
SCFD1-211ENST00000554437 BMP6P22004 513 aa8.53□□□□□ -1.04
SCFD1-211ENST00000554437 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
SCFD1-211ENST00000554437 PCNX4Q63HM2 1172 aa8.53□□□□□ -1.04
SCFD1-211ENST00000554437 KIAA1522Q9P206 1035 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-211ENST00000554437 MEGF11A6BM72 1044 aa8.52□□□□□ -1.05
SCFD1-211ENST00000554437 VAMP1P23763 118 aa8.52□□□□□ -1.05
SCFD1-211ENST00000554437 TTBK2Q6IQ55 1244 aa8.52□□□□□ -1.05
SCFD1-211ENST00000554437 PDZD3Q86UT5 571 aa8.52□□□□□ -1.05
SCFD1-211ENST00000554437 NOC4LQ9BVI4 516 aaKnown RBP8.52□□□□□ -1.05
SCFD1-211ENST00000554437 TMPRSS13Q9BYE2 586 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms