RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 MUC3BQ9H195 1237 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 EEA1Q15075 1411 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 ABCC2Q92887 1545 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 M0R082 166 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 OIP5O43482 229 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 CDC25BP30305 580 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 FANCCQ00597 558 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 LYPD4Q6UWN0 246 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 CHSY3Q70JA7 882 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 TMEM151AQ8N4L1 468 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 ZNF576Q9H609 170 aa7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 SH2B1Q9NRF2 756 aaPredicted RBP7.59□□□□□ -1.19
MTHFD1-206ENST00000554353 DISP1Q96F81 1524 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 RAPGEF2Q9Y4G8 1499 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 SHISA8B8ZZ34 492 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 LILRB5O75023 590 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 CELA2BP08218 269 aaPredicted RBP7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 ITPKAP23677 461 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 CDC27P30260 824 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 ST13P50502 369 aaKnown RBP7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 C8orf86Q6ZUL3 223 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 TTC9Q92623 222 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 BTBD6Q96KE9 485 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 PSMG3-AS1Q96PY0 264 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
MTHFD1-206ENST00000554353 PPRC1Q5VV67 1664 aaKnown RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 HSP90B1P14625 803 aaKnown RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 ERCC5P28715 1186 aaPredicted RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 ZNF157P51786 506 aaPredicted RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 CABP4P57796 275 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 MAP3K10Q02779 954 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 ADAM19Q9H013 955 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 CLEC4MQ9H2X3 399 aaPredicted RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 GPN3Q9UHW5 284 aaPredicted RBP7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 PPM1HQ9ULR3 514 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 ASXL2Q76L83 1435 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 CTTNBP2Q8WZ74 1663 aa7.57□□□□□ -1.2
MTHFD1-206ENST00000554353 UHRF1BP1LA0JNW5 1464 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 PLB1Q6P1J6 1458 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 GLI2P10070 1586 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 UACAQ9BZF9 1416 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 PCDH1Q08174 1060 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 GRIK5Q16478 980 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 ZNF385CQ66K41 422 aaPredicted RBP7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 SOX13Q9UN79 622 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
MTHFD1-206ENST00000554353 EPHA1P21709 976 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 FAAP100Q0VG06 881 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 IKBKEQ14164 716 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 MAP3K11Q16584 847 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 VN1R5Q7Z5H4 357 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 NEDD1Q8NHV4 660 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 CEP44Q9C0F1 390 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 KIAA0556O60303 1618 aa7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 ZCCHC11Q5TAX3 1644 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-206ENST00000554353 KDM5BQ9UGL1 1544 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 MAP3K4Q9Y6R4 1608 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 F6X3S4 739 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 GDF11O95390 407 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 CELA3AP09093 270 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 WFDC8Q8IUA0 241 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 PPME1Q9Y570 386 aa7.54□□□□□ -1.2
MTHFD1-206ENST00000554353 CEP162Q5TB80 1403 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 KIF21BO75037 1637 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 LINC01387J3KSC0 135 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 BAG6P46379 1132 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 ZNF423Q2M1K9 1284 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 ZNF394Q53GI3 561 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 TMEM39AQ9NV64 488 aa7.53□□□□□ -1.2
MTHFD1-206ENST00000554353 EPRSP07814 1512 aaKnown RBP7.52□□□□□ -1.2
MTHFD1-206ENST00000554353 H3BRJ5 948 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms