RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 IL1R1P14778 569 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 GTF2A2P52657 109 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 TAF1CQ15572 869 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 HABP4Q5JVS0 413 aaKnown RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 MFSD14BQ5SR56 506 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 G2E3Q7L622 706 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 OPTNQ96CV9 577 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 HOOK2Q96ED9 719 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 PRMT6Q96LA8 375 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 C9orf78Q9NZ63 289 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 TMOD2Q9NZR1 351 aa10.32□□□□□ -0.76
ACTN1-212ENST00000554158 TTF2Q9UNY4 1162 aaKnown RBP10.32□□□□□ -0.76
ACTN1-212ENST00000554158 USP2O75604 605 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-212ENST00000554158 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-212ENST00000554158 CERS5Q8N5B7 392 aa10.31□□□□□ -0.76
ACTN1-212ENST00000554158 SSC5DA1L4H1 1573 aa10.31□□□□□ -0.76
ACTN1-212ENST00000554158 CCL15-CCL14A0A0B4J2E2 113 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 TCP10L2B9ZVM9 353 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 EN2P19622 333 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-212ENST00000554158 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
ACTN1-212ENST00000554158 CCL15Q16663 113 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 WWC1Q8IX03 1113 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 ARMC5Q96C12 935 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 TDRD3Q9H7E2 651 aaKnown RBP10.3□□□□□ -0.76
ACTN1-212ENST00000554158 ZNF70Q9UC06 446 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-212ENST00000554158 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 PCDHAC2Q9Y5I4 1007 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 IL16Q14005 1332 aa10.3□□□□□ -0.76
ACTN1-212ENST00000554158 SNAP23O00161 211 aa10.29□□□□□ -0.76
ACTN1-212ENST00000554158 CASP7P55210 303 aa10.29□□□□□ -0.76
ACTN1-212ENST00000554158 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
ACTN1-212ENST00000554158 CAVIN4Q5BKX8 364 aa10.29□□□□□ -0.76
ACTN1-212ENST00000554158 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
ACTN1-212ENST00000554158 CEP290O15078 2479 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-212ENST00000554158 MYCP01106 439 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-212ENST00000554158 CETPP11597 493 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 CRKP46108 304 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 CHAF1AQ13111 956 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-212ENST00000554158 UBE4AQ14139 1066 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 DZIP1LQ8IYY4 767 aaKnown RBP10.28□□□□□ -0.76
ACTN1-212ENST00000554158 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-212ENST00000554158 MAST3O60307 1309 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 FAM205AQ6ZU69 1335 aa10.28□□□□□ -0.76
ACTN1-212ENST00000554158 MGAMO43451 1857 aa10.27□□□□□ -0.76
ACTN1-212ENST00000554158 F6X3S4 739 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 GRM8O00222 908 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 GNRH1P01148 92 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 HOXD10P28358 340 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 GJA5P36382 358 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 GYG1P46976 350 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 FOXO4P98177 505 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 VGLL4Q14135 290 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 DCAF15Q66K64 600 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 TEKT1Q969V4 418 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 ZNF333Q96JL9 665 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 PTPN18Q99952 460 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 TMEM39BQ9GZU3 492 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-212ENST00000554158 PTCH2Q9Y6C5 1203 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 MROH5Q6ZUA9 1318 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 FANCIQ9NVI1 1328 aa10.27□□□□□ -0.77
ACTN1-212ENST00000554158 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-212ENST00000554158 PRMT2P55345 433 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 SNAPC2Q13487 334 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 ERO1BQ86YB8 467 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 HS6ST3Q8IZP7 471 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
ACTN1-212ENST00000554158 BRI3BPQ8WY22 251 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 WRNIP1Q96S55 665 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 SRCIN1Q9C0H9 1055 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 ZCCHC17Q9NP64 241 aaKnown RBP10.26□□□□□ -0.77
ACTN1-212ENST00000554158 CENPFP49454 3210 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 ZSWIM8A7E2V4 1837 aa10.26□□□□□ -0.77
ACTN1-212ENST00000554158 VAMP4O75379 141 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 ALDH1L1O75891 902 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 HDLBPQ00341 1268 aaKnown RBP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 EXOSC9Q06265 439 aaKnown RBP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 GSE1Q14687 1217 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 METTL24Q5JXM2 366 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 BEND3Q5T5X7 828 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 WDR63Q8IWG1 891 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 DPF3Q92784 378 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 BIN2Q9UBW5 565 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-212ENST00000554158 IRS2Q9Y4H2 1338 aa10.25□□□□□ -0.77
ACTN1-212ENST00000554158 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
ACTN1-212ENST00000554158 TLR2O60603 784 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms