RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 AP1G2O75843 785 aa9.35□□□□□ -0.91
ATXN3-224ENST00000554040 NPR1P16066 1061 aa9.35□□□□□ -0.91
ATXN3-224ENST00000554040 IARSP41252 1262 aaKnown RBP9.35□□□□□ -0.91
ATXN3-224ENST00000554040 CBLBQ13191 982 aa9.35□□□□□ -0.91
ATXN3-224ENST00000554040 Q6ZVU0 165 aa9.35□□□□□ -0.91
ATXN3-224ENST00000554040 KIF20BQ96Q89 1820 aa9.35□□□□□ -0.91
ATXN3-224ENST00000554040 SLX4Q8IY92 1834 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 TRAF5O00463 557 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 CAMTA2O94983 1202 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 IL6STP40189 918 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 EPS15P42566 896 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 OLFM4Q6UX06 510 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
ATXN3-224ENST00000554040 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 TEX13AQ9BXU3 409 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-224ENST00000554040 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.92
ATXN3-224ENST00000554040 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 UPP2O95045 317 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 USP17L8P0C7I0 530 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 IL13P35225 146 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
ATXN3-224ENST00000554040 USP50Q70EL3 339 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-224ENST00000554040 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
ATXN3-224ENST00000554040 ZSCAN1Q8NBB4 408 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
ATXN3-224ENST00000554040 ADAMTSL1Q8N6G6 1762 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 CELF2O95319 508 aaKnown RBP9.32□□□□□ -0.92
ATXN3-224ENST00000554040 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 SCNN1DP51172 638 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
ATXN3-224ENST00000554040 CIAPIN1Q6FI81 312 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-224ENST00000554040 TTC5Q8N0Z6 440 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-224ENST00000554040 PSMD1Q99460 953 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
ATXN3-224ENST00000554040 A1BGP04217 495 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 RFC5P40937 340 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 SOX10P56693 466 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 ANKRD31Q8N7Z5 1873 aa9.31□□□□□ -0.92
ATXN3-224ENST00000554040 SPINT1O43278 529 aa9.3□□□□□ -0.92
ATXN3-224ENST00000554040 PTK2Q05397 1052 aa9.3□□□□□ -0.92
ATXN3-224ENST00000554040 MTHFSDQ2M296 383 aaKnown RBP9.3□□□□□ -0.92
ATXN3-224ENST00000554040 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
ATXN3-224ENST00000554040 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
ATXN3-224ENST00000554040 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
ATXN3-224ENST00000554040 CDV3Q9UKY7 258 aaKnown RBP9.3□□□□□ -0.92
ATXN3-224ENST00000554040 MRC1P22897 1456 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 HEG1Q9ULI3 1381 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 TTLL8A6PVC2 850 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 NOGQ13253 232 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 MORC1Q86VD1 984 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 ADARB2Q9NS39 739 aaKnown RBP9.29□□□□□ -0.92
ATXN3-224ENST00000554040 THSD7BQ9C0I4 1608 aa9.29□□□□□ -0.92
ATXN3-224ENST00000554040 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-224ENST00000554040 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
ATXN3-224ENST00000554040 HMOX1P09601 288 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 GLIS2Q9BZE0 524 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-224ENST00000554040 PANK3Q9H999 370 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 NIP7Q9Y221 180 aaKnown RBP eCLIP9.27□□□□□ -0.93
ATXN3-224ENST00000554040 ZNF652Q9Y2D9 606 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.93
ATXN3-224ENST00000554040 LTBP1Q14766 1721 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 SNED1Q8TER0 1413 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 PTSQ03393 145 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
ATXN3-224ENST00000554040 TEFQ10587 303 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.93
ATXN3-224ENST00000554040 CRY2Q49AN0 593 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 CDC37L1Q7L3B6 337 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
ATXN3-224ENST00000554040 GCC1Q96CN9 775 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 ZNF408Q9H9D4 720 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
ATXN3-224ENST00000554040 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
ATXN3-224ENST00000554040 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms