RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 IARSP41252 1262 aaKnown RBP12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 AIDAQ96BJ3 306 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 USP26Q9BXU7 913 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 JAG2Q9Y219 1238 aa12.55□□□□□ -0.4
TMEM55B-205ENST00000554028 USP17L3A6NCW0 530 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 USP17L4A6NCW7 530 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 USP17L1Q7RTZ2 530 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 MAST3O60307 1309 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
TMEM55B-205ENST00000554028 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 BAG3O95817 575 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 GNAT2P19087 354 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 PRDX5P30044 214 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 MECOMQ03112 1051 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 CTNNA3Q9UI47 895 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 ZNRF3Q9ULT6 936 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
TMEM55B-205ENST00000554028 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 GPAA1O43292 621 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 APPP05067 770 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 ANP32AP39687 249 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 NSUN4Q96CB9 384 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 DSCC1Q9BVC3 393 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 NACAP1Q9BZK3 213 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 LSG1Q9H089 658 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 PUS7LQ9H0K6 701 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
TMEM55B-205ENST00000554028 M0R2C6 588 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 NFKBIEO00221 500 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 TNIP1Q15025 636 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 ZNF589Q86UQ0 364 aaPredicted RBP12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
TMEM55B-205ENST00000554028 PATL2C9JE40 543 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 MBD4O95243 580 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 CHGBP05060 677 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 PLCG2P16885 1265 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 EIF6P56537 245 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 ANAPC15P60006 121 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 IL25Q9H293 177 aa12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 TTF2Q9UNY4 1162 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-205ENST00000554028 CACNA1SQ13698 1873 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 F8W031 263 aaPredicted RBP12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 RAD17O75943 681 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 HSPA4P34932 840 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 PTH1RQ03431 593 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 GPR162Q16538 588 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 DACT2Q5SW24 774 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 OGFOD1Q8N543 542 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 ARMT1Q9H993 441 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 HDAC9Q9UKV0 1011 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 RBM8AQ9Y5S9 174 aaKnown RBP12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 AKAP11Q9UKA4 1901 aa12.49□□□□□ -0.41
TMEM55B-205ENST00000554028 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 MROH7-TTC4A0A0A0MT08 1334 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 VIL1P09327 827 aaKnown RBP12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 LMNB1P20700 586 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 MMP14P50281 582 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 HDLBPQ00341 1268 aaKnown RBP12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 RASSF7Q02833 373 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 KRT32Q14532 448 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 TEKT1Q969V4 418 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 AATFQ9NY61 560 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMEM55B-205ENST00000554028 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms