RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	PI16	Q6UXB8	463 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	ENGASE	Q8NFI3	743 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	IGDCC4	Q8TDY8	1250 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	SYTL4	Q96C24	671 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	MPHOSPH8	Q99549	860 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	POLR3E	Q9NVU0	708 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	BSDC1	Q9NW68	430 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	DACT1	Q9NYF0	836 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	ANAPC4	Q9UJX5	808 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	STK36	Q9NRP7	1315 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	KAT6B	Q8WYB5	2073 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	SCN7A	Q01118	1682 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	HCLS1	P14317	486 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	MSN	P26038	577 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	PPP2R5B	Q15173	497 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	FAM173B	Q6P4H8	233 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	GIMAP6	Q6P9H5	292 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	ILDR1	Q86SU0	546 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	TMTC2	Q8N394	836 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	TDRD7	Q8NHU6	1098 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	LRRC2	Q9BYS8	371 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	TFIP11	Q9UBB9	837 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	WWC3	Q9ULE0	1092 aa		10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	CCDC9	Q9Y3X0	531 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKCH-209	ENST00000553889	C4A	P0C0L4	1744 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	C4B	P0C0L5	1744 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	COL24A1	Q17RW2	1714 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	KLF18	A0A0U1RQI7	1052 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	GSG1L2	A8MUP6	293 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	IDH1	O75874	414 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	PC	P11498	1178 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	TYRO3	Q06418	890 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	ADAL	Q6DHV7	355 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	CPLX2	Q6PUV4	134 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	IFNL3	Q8IZI9	196 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	RNF214	Q8ND24	703 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	KCNG4	Q8TDN1	519 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	STAG1	Q8WVM7	1258 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	AIDA	Q96BJ3	306 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	DDX11	Q96FC9	970 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	KRT23	Q9C075	422 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	TNMD	Q9H2S6	317 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	MRVI1	Q9Y6F6	885 aa		10.79	□□□□□ -0.68
PRKCH-209	ENST00000553889	FAM237A	A0A1B0GTK4	181 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	GOLGA8B	A8MQT2	603 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	RPS6KA4	O75676	772 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	ADAMTS2	O95450	1211 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	ADCY5	O95622	1261 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	FGR	P09769	529 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	CCT2	P78371	535 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	FAM160A1	Q05DH4	1040 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	CHRND	Q07001	517 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	SNW1	Q13573	536 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	NTRK3	Q16288	839 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	AKNAD1	Q5T1N1	836 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	APOA5	Q6Q788	366 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	TBC1D10C	Q8IV04	446 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	LINC00301	Q8NCQ3	95 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	C8orf76	Q96K31	380 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	USP28	Q96RU2	1077 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	NACAP1	Q9BZK3	213 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	NYX	Q9GZU5	481 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	NCOA5	Q9HCD5	579 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	SEC31B	Q9NQW1	1179 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	GNL3L	Q9NVN8	582 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	ORC3	Q9UBD5	711 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	NARF	Q9UHQ1	456 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	THSD7A	Q9UPZ6	1657 aa		10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.78	□□□□□ -0.68
PRKCH-209	ENST00000553889		A0A1B0GUL6	1792 aa		10.77	□□□□□ -0.68
PRKCH-209	ENST00000553889	CPLX1	O14810	134 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	NR1I2	O75469	434 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	IFNAR1	P17181	557 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	U2AF2	P26368	475 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	HAND2	P61296	217 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	MYSM1	Q5VVJ2	828 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	SARM1	Q6SZW1	724 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	FBXO33	Q7Z6M2	555 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	LINC00116	Q8NCU8	138 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	RNF41	Q9H4P4	317 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	LY9	Q9HBG7	655 aa		10.77	□□□□□ -0.69
PRKCH-209	ENST00000553889	MBD4	O95243	580 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	CDC25B	P30305	580 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	KIF23	Q02241	960 aa	Predicted RBP	10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	SLC39A14	Q15043	492 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	CCDC73	Q6ZRK6	1079 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	CYB5R4	Q7L1T6	521 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	ANKRD18A	Q8IVF6	992 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	HELB	Q8NG08	1087 aa	Predicted RBP	10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	ACSBG1	Q96GR2	724 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	TIGD1	Q96MW7	591 aa		10.76	□□□□□ -0.69
PRKCH-209	ENST00000553889	BRIP1	Q9BX63	1249 aa		10.76	□□□□□ -0.69

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