RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 CRKP46108 304 aa11.44□□□□□ -0.58
CHD8-206ENST00000553870 RBM5P52756 815 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD8-206ENST00000553870 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 APOBEC3FQ8IUX4 373 aaKnown RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD8-206ENST00000553870 TEKT1Q969V4 418 aa11.44□□□□□ -0.58
CHD8-206ENST00000553870 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
CHD8-206ENST00000553870 CCDC8Q9H0W5 538 aaPredicted RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
CHD8-206ENST00000553870 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
CHD8-206ENST00000553870 DBNLQ9UJU6 430 aaKnown RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 ZNF646O15015 1829 aaPredicted RBP11.44□□□□□ -0.58
CHD8-206ENST00000553870 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 TMED8Q6PL24 325 aaPredicted RBP11.43□□□□□ -0.58
CHD8-206ENST00000553870 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 USP48Q86UV5 1035 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
CHD8-206ENST00000553870 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
CHD8-206ENST00000553870 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 GGA3Q9NZ52 723 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 PPP2R3BQ9Y5P8 575 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 ARAP2Q8WZ64 1704 aa11.43□□□□□ -0.58
CHD8-206ENST00000553870 LDHCP07864 332 aa11.42□□□□□ -0.58
CHD8-206ENST00000553870 MCAMP43121 646 aa11.42□□□□□ -0.58
CHD8-206ENST00000553870 TNFAIP1Q13829 316 aa11.42□□□□□ -0.58
CHD8-206ENST00000553870 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
CHD8-206ENST00000553870 ABCF2Q9UG63 623 aa11.42□□□□□ -0.58
CHD8-206ENST00000553870 COL1A1P02452 1464 aaPredicted RBP11.41□□□□□ -0.58
CHD8-206ENST00000553870 APBB1O00213 710 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 MAP4K4O95819 1239 aaPredicted RBP11.41□□□□□ -0.58
CHD8-206ENST00000553870 PRDX5P30044 214 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 GSTO1P78417 241 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 GRIK5Q16478 980 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 EXOC6Q8TAG9 804 aa11.41□□□□□ -0.58
CHD8-206ENST00000553870 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 TRAF5O00463 557 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 CELF2O95319 508 aaKnown RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 ATP5JP18859 108 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 NF2P35240 595 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 TNNI2P48788 182 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 FKBP1BP68106 108 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 TTF1Q15361 905 aaPredicted RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 CST9Q5W186 159 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 APOBEC3HQ6NTF7 200 aaKnown RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 DZIP1Q86YF9 867 aaKnown RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 TLR7Q9NYK1 1049 aaKnown RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 LRP2BPQ9P2M1 347 aa11.4□□□□□ -0.58
CHD8-206ENST00000553870 ZNF70Q9UC06 446 aaPredicted RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
CHD8-206ENST00000553870 GAKO14976 1311 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 ADM5C9JUS6 153 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 SUPT20HL1Q3ZLR7 823 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 C2orf69Q8N8R5 385 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
CHD8-206ENST00000553870 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
CHD8-206ENST00000553870 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
CHD8-206ENST00000553870 POLR2AP24928 1970 aaKnown RBP11.39□□□□□ -0.59
CHD8-206ENST00000553870 GPR75-ASB3A0A0A6YYF3 556 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 CYP2E1P05181 493 aaPredicted RBP11.38□□□□□ -0.59
CHD8-206ENST00000553870 ZAP70P43403 619 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 MECOMQ03112 1051 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 VEZTQ9HBM0 779 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 GBA2Q9HCG7 927 aaPredicted RBP11.38□□□□□ -0.59
CHD8-206ENST00000553870 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
CHD8-206ENST00000553870 CLRN2A0PK11 232 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
CHD8-206ENST00000553870 BAG3O95817 575 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD8-206ENST00000553870 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 RASA3Q14644 834 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 SAPCD2Q86UD0 394 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 CERS3Q8IU89 383 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 SMC5Q8IY18 1101 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 HOOK2Q96ED9 719 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
CHD8-206ENST00000553870 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
CHD8-206ENST00000553870 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms