RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
PRKCH-208ENST00000553846 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
PRKCH-208ENST00000553846 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-208ENST00000553846 TAF5LO75529 589 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 PRMT2P55345 433 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 G2E3Q7L622 706 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 SLC17A8Q8NDX2 589 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 MGAMO43451 1857 aa11.67□□□□□ -0.54
PRKCH-208ENST00000553846 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 GJB1P08034 283 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 GNAI1P63096 354 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 FOXO4P98177 505 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 MOGSQ13724 837 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 GRIK5Q16478 980 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 DZIP1LQ8IYY4 767 aaKnown RBP11.66□□□□□ -0.54
PRKCH-208ENST00000553846 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-208ENST00000553846 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
PRKCH-208ENST00000553846 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
PRKCH-208ENST00000553846 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
PRKCH-208ENST00000553846 IRF6O14896 467 aa11.65□□□□□ -0.54
PRKCH-208ENST00000553846 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
PRKCH-208ENST00000553846 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
PRKCH-208ENST00000553846 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
PRKCH-208ENST00000553846 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
PRKCH-208ENST00000553846 CETPP11597 493 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 CCL5P13501 91 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 OSBPP22059 807 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 KCNJ4P48050 445 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-208ENST00000553846 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 PPIL2Q13356 520 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
PRKCH-208ENST00000553846 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 GRK4P32298 578 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 SNAPC2Q13487 334 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 MFSD14BQ5SR56 506 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 DPF3Q92784 378 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
PRKCH-208ENST00000553846 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 CSADQ9Y600 493 aa11.63□□□□□ -0.55
PRKCH-208ENST00000553846 DNAH12Q6ZR08 3092 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 APAF1O14727 1248 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 BCRP11274 1271 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 PSMC4P43686 418 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 CRKP46108 304 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-208ENST00000553846 HTATIP2Q9BUP3 242 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 KCNH4Q9UQ05 1017 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 PTPRFP10586 1907 aa11.62□□□□□ -0.55
PRKCH-208ENST00000553846 FARP2O94887 1054 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 HDLBPQ00341 1268 aaKnown RBP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 KIF22Q14807 665 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 ANKRD23Q86SG2 305 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-208ENST00000553846 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
PRKCH-208ENST00000553846 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 ATRNL1Q5VV63 1379 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 CACNB3P54284 484 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 PRKCZQ05513 592 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 PPATQ06203 517 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 FLIIQ13045 1269 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
PRKCH-208ENST00000553846 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
PRKCH-208ENST00000553846 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 TSR2Q969E8 191 aaKnown RBP11.6□□□□□ -0.55
PRKCH-208ENST00000553846 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-208ENST00000553846 GDF15Q99988 308 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 ZNF112Q9UJU3 913 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 NR2E3Q9Y5X4 410 aa11.6□□□□□ -0.55
PRKCH-208ENST00000553846 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 TTC28Q96AY4 2481 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 PDHXO00330 501 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 INPP5BP32019 993 aa11.59□□□□□ -0.55
PRKCH-208ENST00000553846 GYG1P46976 350 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms