RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 LSG1Q9H089 658 aaKnown RBP14.14□□□□□ -0.15
NEK9-202ENST00000553823 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
NEK9-202ENST00000553823 SOCS7O14512 581 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 ECE2O60344 883 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 GTF2IP78347 998 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 TMED8Q6PL24 325 aaPredicted RBP14.13□□□□□ -0.15
NEK9-202ENST00000553823 TAOK3Q9H2K8 898 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 DBNDD1Q9H9R9 158 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 MAST2Q6P0Q8 1798 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 MYH2Q9UKX2 1941 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 MAST3O60307 1309 aa14.13□□□□□ -0.15
NEK9-202ENST00000553823 M0R2C6 588 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 LDHBP07195 334 aaKnown RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 PRDX5P30044 214 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 MFSD14BQ5SR56 506 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 NAA16Q6N069 864 aaPredicted RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 NSUN4Q96CB9 384 aaKnown RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 SYT17Q9BSW7 474 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 PUS7LQ9H0K6 701 aaKnown RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
NEK9-202ENST00000553823 PSME4Q14997 1843 aa14.12□□□□□ -0.15
NEK9-202ENST00000553823 GPAA1O43292 621 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 CYP7A1P22680 504 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 IARSP41252 1262 aaKnown RBP14.11□□□□□ -0.15
NEK9-202ENST00000553823 MECOMQ03112 1051 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 PTH1RQ03431 593 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 DZIP1Q86YF9 867 aaKnown RBP14.11□□□□□ -0.15
NEK9-202ENST00000553823 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 SUGT1Q9Y2Z0 365 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
NEK9-202ENST00000553823 NFKBIEO00221 500 aa14.1□□□□□ -0.15
NEK9-202ENST00000553823 MCCP23508 829 aa14.1□□□□□ -0.15
NEK9-202ENST00000553823 STRIP1Q5VSL9 837 aa14.1□□□□□ -0.15
NEK9-202ENST00000553823 MAP4K1Q92918 833 aa14.1□□□□□ -0.15
NEK9-202ENST00000553823 ZNF646O15015 1829 aaPredicted RBP14.09□□□□□ -0.15
NEK9-202ENST00000553823 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 FKBP1AP62942 108 aaKnown RBP14.09□□□□□ -0.15
NEK9-202ENST00000553823 GSTO1P78417 241 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 GRIK5Q16478 980 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 NIM1KQ8IY84 436 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 ZNF384Q8TF68 577 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 AIDAQ96BJ3 306 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
NEK9-202ENST00000553823 YDJCA8MPS7 323 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 MBD4O95243 580 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 LDHCP07864 332 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 HSPA4P34932 840 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 DACT2Q5SW24 774 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 CERS5Q8N5B7 392 aa14.08□□□□□ -0.16
NEK9-202ENST00000553823 RBM8AQ9Y5S9 174 aaKnown RBP14.08□□□□□ -0.16
NEK9-202ENST00000553823 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
NEK9-202ENST00000553823 COL4A5P29400 1685 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 MAGEB6P1A0A0J9YX57 407 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
NEK9-202ENST00000553823 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 MIGA1Q8NAN2 632 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
NEK9-202ENST00000553823 ARMT1Q9H993 441 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 ZNRF3Q9ULT6 936 aa14.07□□□□□ -0.16
NEK9-202ENST00000553823 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
NEK9-202ENST00000553823 GNAT2P19087 354 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 ANP32AP39687 249 aaKnown RBP14.06□□□□□ -0.16
NEK9-202ENST00000553823 ANAPC15P60006 121 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 RASSF7Q02833 373 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 NECTIN1Q15223 517 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 DIXDC1Q155Q3 683 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
NEK9-202ENST00000553823 MXD3Q9BW11 206 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 TTF2Q9UNY4 1162 aaKnown RBP14.06□□□□□ -0.16
NEK9-202ENST00000553823 SBF1O95248 1867 aa14.06□□□□□ -0.16
NEK9-202ENST00000553823 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
NEK9-202ENST00000553823 FOXP2O15409 715 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 DYNLL1P63167 89 aaKnown RBP14.05□□□□□ -0.16
NEK9-202ENST00000553823 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 CREB3L3Q68CJ9 461 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 ARHGAP27Q6ZUM4 889 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
NEK9-202ENST00000553823 KIF2CQ99661 725 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 NOL10Q9BSC4 688 aaKnown RBP14.05□□□□□ -0.16
NEK9-202ENST00000553823 AATFQ9NY61 560 aaKnown RBP eCLIP14.05□□□□□ -0.16
NEK9-202ENST00000553823 PALD1Q9ULE6 856 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 MROH7-TTC4A0A0A0MT08 1334 aa14.05□□□□□ -0.16
NEK9-202ENST00000553823 F8W031 263 aaPredicted RBP14.04□□□□□ -0.16
NEK9-202ENST00000553823 SLC27A2O14975 620 aa14.04□□□□□ -0.16
NEK9-202ENST00000553823 RAD17O75943 681 aa14.04□□□□□ -0.16
NEK9-202ENST00000553823 BAG3O95817 575 aa14.04□□□□□ -0.16
NEK9-202ENST00000553823 APPP05067 770 aa14.04□□□□□ -0.16
NEK9-202ENST00000553823 VIL1P09327 827 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms