RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
ACTN1-210ENST00000553779 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
ACTN1-210ENST00000553779 MAST3O60307 1309 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-210ENST00000553779 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
ACTN1-210ENST00000553779 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
ACTN1-210ENST00000553779 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 HTTP42858 3142 aa12.42□□□□□ -0.42
ACTN1-210ENST00000553779 PTPRCP08575 1304 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 AOX1Q06278 1338 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTN1-210ENST00000553779 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
ACTN1-210ENST00000553779 CRHR2Q13324 411 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 ARHGEF6Q15052 776 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
ACTN1-210ENST00000553779 CD99L2Q8TCZ2 262 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-210ENST00000553779 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
ACTN1-210ENST00000553779 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-210ENST00000553779 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
ACTN1-210ENST00000553779 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-210ENST00000553779 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
ACTN1-210ENST00000553779 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
ACTN1-210ENST00000553779 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
ACTN1-210ENST00000553779 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 E9PSI1 815 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 SLC5A1P13866 664 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 GTF2A2P52657 109 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 CACNB3P54284 484 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 CCL15Q16663 113 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
ACTN1-210ENST00000553779 PDE8BO95263 885 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 SP3Q02447 781 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 VGLL4Q14135 290 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
ACTN1-210ENST00000553779 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
ACTN1-210ENST00000553779 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 WRNIP1Q96S55 665 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 ZFYVE28Q9HCC9 887 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 MGAMO43451 1857 aa12.38□□□□□ -0.43
ACTN1-210ENST00000553779 UTYO14607 1347 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 GJA5P36382 358 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 BCAMP50895 628 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
ACTN1-210ENST00000553779 KIF22Q14807 665 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-210ENST00000553779 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
ACTN1-210ENST00000553779 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
ACTN1-210ENST00000553779 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-210ENST00000553779 CETPP11597 493 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 SIL1Q9H173 461 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 PTPN22Q9Y2R2 807 aa12.36□□□□□ -0.43
ACTN1-210ENST00000553779 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
ACTN1-210ENST00000553779 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-210ENST00000553779 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
ACTN1-210ENST00000553779 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 ZDHHC15Q96MV8 337 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 ZNF341Q9BYN7 854 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 KIF16BQ96L93 1317 aa12.35□□□□□ -0.43
ACTN1-210ENST00000553779 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 EYA2O00167 538 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 GRIK5Q16478 980 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 ATP2B3Q16720 1220 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 ERO1BQ86YB8 467 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 LPIN2Q92539 896 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 PTPN18Q99952 460 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
ACTN1-210ENST00000553779 PTPRFP10586 1907 aa12.33□□□□□ -0.44
ACTN1-210ENST00000553779 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-210ENST00000553779 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-210ENST00000553779 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
ACTN1-210ENST00000553779 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-210ENST00000553779 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms