RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 UBAP1LF5GYI3 381 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 NAPAP54920 295 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 SLC27A2O14975 620 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 KRT2P35908 639 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 SGSM2O43147 1006 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 SMC1AQ14683 1233 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 NEBLO76041 1014 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 ST5P78524 1137 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 RNF187Q5TA31 235 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 MIGA1Q8NAN2 632 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
ARHGEF40-202ENST00000553709 CCDC172P0C7W6 258 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 RXRAP19793 462 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 CEP112Q8N8E3 955 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 TRERF1Q96PN7 1200 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 DNAI2Q9GZS0 605 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 METTL22Q9BUU2 404 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 USP19O94966 1318 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 CTAGE9A4FU28 777 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 C6orf50Q9HD87 102 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 V9GYY5 206 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-202ENST00000553709 EYA2O00167 538 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 HOOK3Q86VS8 718 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 INCENPQ9NQS7 918 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 HSF2BPO75031 334 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 KRT83P78385 493 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 TACC1O75410 805 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 STX17P56962 302 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
ARHGEF40-202ENST00000553709 ELP1O95163 1332 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 TIMM10P62072 90 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 GOLGA1Q92805 767 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 USP6P35125 1406 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 CTNNA2P26232 953 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 MYL5Q02045 173 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZNF445P59923 1031 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 TRAF1Q13077 416 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 MCM6Q14566 821 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 DRC1Q96MC2 740 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 MCM9Q9NXL9 1143 aa17.4■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.38
ARHGEF40-202ENST00000553709 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 KRT86O43790 486 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 DDB1Q16531 1140 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 TBC1D5Q92609 795 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 MMRN2Q9H8L6 949 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 IQUBQ8NA54 791 aa17.39■□□□□ 0.37
ARHGEF40-202ENST00000553709 BICDL2A1A5D9 508 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 MCM7P33993 719 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 KIF5AQ12840 1032 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 SYT10Q6XYQ8 523 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 NYXQ9GZU5 481 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 MBD4O95243 580 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 CCDC174Q6PII3 467 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 UBXN1Q04323 297 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 KRT79Q5XKE5 535 aa17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-202ENST00000553709 CCDC42Q96M95 316 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 CLSTN2Q9H4D0 955 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 PICALMQ13492 652 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 KARSQ15046 597 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 GIMAP7Q8NHV1 300 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms