RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 DHX29Q7Z478 1369 aaKnown RBP6.97□□□□□ -1.29
ATXN3-220ENST00000553491 A6NHS1 94 aa6.97□□□□□ -1.29
ATXN3-220ENST00000553491 ABCC5O15440 1437 aa6.97□□□□□ -1.29
ATXN3-220ENST00000553491 SELPP16109 830 aa6.97□□□□□ -1.29
ATXN3-220ENST00000553491 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
ATXN3-220ENST00000553491 DAPK1P53355 1430 aa6.97□□□□□ -1.29
ATXN3-220ENST00000553491 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
ATXN3-220ENST00000553491 SF3B2Q13435 895 aaKnown RBP6.97□□□□□ -1.29
ATXN3-220ENST00000553491 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
ATXN3-220ENST00000553491 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-220ENST00000553491 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.29
ATXN3-220ENST00000553491 FAM13AO94988 1023 aa6.96□□□□□ -1.3
ATXN3-220ENST00000553491 HSPA2P54652 639 aa6.96□□□□□ -1.3
ATXN3-220ENST00000553491 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
ATXN3-220ENST00000553491 ADAMTSL4Q6UY14 1074 aa6.96□□□□□ -1.3
ATXN3-220ENST00000553491 FOXD4L4Q8WXT5 416 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-220ENST00000553491 POLIQ9UNA4 740 aa6.96□□□□□ -1.3
ATXN3-220ENST00000553491 MAST1Q9Y2H9 1570 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 DEAF1O75398 565 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-220ENST00000553491 GHRHP01286 108 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
ATXN3-220ENST00000553491 ELNP15502 786 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-220ENST00000553491 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-220ENST00000553491 DTWD1Q8N5C7 304 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 CEP120Q8N960 986 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
ATXN3-220ENST00000553491 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 AGLP35573 1532 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 KIF15Q9NS87 1388 aa6.95□□□□□ -1.3
ATXN3-220ENST00000553491 MROH2AA6NES4 1674 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 ATP11AP98196 1134 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 HYAL2Q12891 473 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 LENG1Q96BZ8 264 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-220ENST00000553491 CCDC87Q9NVE4 849 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 KANK1Q14678 1352 aa6.94□□□□□ -1.3
ATXN3-220ENST00000553491 TM4SF5O14894 197 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 APBA3O96018 575 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 ADGRE1Q14246 886 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 GJD3Q8N144 294 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 PLXNC1O60486 1568 aa6.93□□□□□ -1.3
ATXN3-220ENST00000553491 NFKBIEO00221 500 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 ADAM23O75077 832 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 GATA4P43694 442 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 RAC1P63000 192 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 GDF6Q6KF10 455 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-220ENST00000553491 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 CNTLNQ9NXG0 1405 aa6.92□□□□□ -1.3
ATXN3-220ENST00000553491 EIF2AK4Q9P2K8 1649 aaKnown RBP6.91□□□□□ -1.3
ATXN3-220ENST00000553491 C9orf172C9J069 976 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 DLL1O00548 723 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 ACPPP15309 386 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 PCSK2P16519 638 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 MBTPS1Q14703 1052 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
ATXN3-220ENST00000553491 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 RBSNQ9H1K0 784 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 MYO5BQ9ULV0 1848 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
ATXN3-220ENST00000553491 CAMSAP1Q5T5Y3 1602 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 TNFRSF21O75509 655 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 FURINP09958 794 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 ITGB7P26010 798 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 DOC2BQ14184 412 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
ATXN3-220ENST00000553491 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-220ENST00000553491 DCTN4Q9UJW0 460 aa6.9□□□□□ -1.3
ATXN3-220ENST00000553491 PTPRKQ15262 1439 aa6.9□□□□□ -1.31
ATXN3-220ENST00000553491 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
ATXN3-220ENST00000553491 CES1P23141 567 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 MAPK1P28482 360 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 USP5P45974 858 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 UHRF1BP1Q6BDS2 1440 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
ATXN3-220ENST00000553491 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms