RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-208ENST00000553370 GPR25O00155 361 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 FKTNO75072 461 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 FOXO4P98177 505 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-208ENST00000553370 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
ACTN1-208ENST00000553370 IL1R1P14778 569 aa12.48□□□□□ -0.41
ACTN1-208ENST00000553370 TM4SF4P48230 202 aa12.48□□□□□ -0.41
ACTN1-208ENST00000553370 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
ACTN1-208ENST00000553370 C15orf52Q6ZUT6 534 aaKnown RBP12.48□□□□□ -0.41
ACTN1-208ENST00000553370 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
ACTN1-208ENST00000553370 CERS5Q8N5B7 392 aa12.48□□□□□ -0.41
ACTN1-208ENST00000553370 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
ACTN1-208ENST00000553370 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 GYG1P46976 350 aa12.47□□□□□ -0.41
ACTN1-208ENST00000553370 TNNI2P48788 182 aa12.47□□□□□ -0.41
ACTN1-208ENST00000553370 FKBP1AP62942 108 aaKnown RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
ACTN1-208ENST00000553370 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-208ENST00000553370 WNK4Q96J92 1243 aa12.47□□□□□ -0.41
ACTN1-208ENST00000553370 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
ACTN1-208ENST00000553370 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 INHBEP58166 350 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 METTL24Q5JXM2 366 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 FBXO46Q6PJ61 603 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-208ENST00000553370 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 TMOD2Q9NZR1 351 aa12.46□□□□□ -0.41
ACTN1-208ENST00000553370 SSC5DA1L4H1 1573 aa12.46□□□□□ -0.42
ACTN1-208ENST00000553370 CEP290O15078 2479 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
ACTN1-208ENST00000553370 RASA3Q14644 834 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-208ENST00000553370 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 ANKRD13AQ8IZ07 590 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 SUCLG2Q96I99 432 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-208ENST00000553370 ELP3Q9H9T3 547 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-208ENST00000553370 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 CSADQ9Y600 493 aa12.45□□□□□ -0.42
ACTN1-208ENST00000553370 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
ACTN1-208ENST00000553370 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-208ENST00000553370 SLC34A2O95436 690 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
ACTN1-208ENST00000553370 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
ACTN1-208ENST00000553370 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-208ENST00000553370 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 CENPFP49454 3210 aa12.44□□□□□ -0.42
ACTN1-208ENST00000553370 FAM205AQ6ZU69 1335 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 UNCXA6NJT0 531 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 CRKP46108 304 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 MAP3K11Q16584 847 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
ACTN1-208ENST00000553370 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
ACTN1-208ENST00000553370 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
ACTN1-208ENST00000553370 MAST3O60307 1309 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-208ENST00000553370 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
ACTN1-208ENST00000553370 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
ACTN1-208ENST00000553370 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 HTTP42858 3142 aa12.42□□□□□ -0.42
ACTN1-208ENST00000553370 PTPRCP08575 1304 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 AOX1Q06278 1338 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTN1-208ENST00000553370 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
ACTN1-208ENST00000553370 CRHR2Q13324 411 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 ARHGEF6Q15052 776 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
ACTN1-208ENST00000553370 CD99L2Q8TCZ2 262 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-208ENST00000553370 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
ACTN1-208ENST00000553370 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-208ENST00000553370 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
ACTN1-208ENST00000553370 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-208ENST00000553370 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
ACTN1-208ENST00000553370 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
ACTN1-208ENST00000553370 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
ACTN1-208ENST00000553370 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
ACTN1-208ENST00000553370 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-208ENST00000553370 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms