RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 NECTIN1Q15223 517 aa22.21■■□□□ 1.15
LRP1-204ENST00000553277 TMED8Q6PL24 325 aaPredicted RBP22.21■■□□□ 1.15
LRP1-204ENST00000553277 RASEFQ8IZ41 740 aa22.21■■□□□ 1.15
LRP1-204ENST00000553277 ZSCAN31Q96LW9 406 aaPredicted RBP22.21■■□□□ 1.15
LRP1-204ENST00000553277 FAM227BQ96M60 508 aa22.21■■□□□ 1.15
LRP1-204ENST00000553277 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.21■■□□□ 1.15
LRP1-204ENST00000553277 HELLSQ9NRZ9 838 aa22.21■■□□□ 1.15
LRP1-204ENST00000553277 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.21■■□□□ 1.15
LRP1-204ENST00000553277 CCDC171Q6TFL3 1326 aa22.21■■□□□ 1.15
LRP1-204ENST00000553277 A0A0D9SFI3 127 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 PDIA4P13667 645 aaKnown RBP22.2■■□□□ 1.15
LRP1-204ENST00000553277 UBE3CQ15386 1083 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 ZSCAN25Q6NSZ9 544 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 GPR101Q96P66 508 aaPredicted RBP22.2■■□□□ 1.15
LRP1-204ENST00000553277 PSMD1Q99460 953 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 PANK2Q9BZ23 570 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 ZC3H12CQ9C0D7 883 aaKnown RBP22.2■■□□□ 1.15
LRP1-204ENST00000553277 ZSWIM6Q9HCJ5 1215 aa22.2■■□□□ 1.15
LRP1-204ENST00000553277 C21orf2O43822 256 aa22.2■■□□□ 1.14
LRP1-204ENST00000553277 PRPF40AO75400 957 aaKnown RBP22.2■■□□□ 1.14
LRP1-204ENST00000553277 WASHC4Q2M389 1173 aa22.2■■□□□ 1.14
LRP1-204ENST00000553277 CCDC93Q567U6 631 aa22.2■■□□□ 1.14
LRP1-204ENST00000553277 SUPT20HQ8NEM7 779 aa22.2■■□□□ 1.14
LRP1-204ENST00000553277 MAP4K1Q92918 833 aa22.2■■□□□ 1.14
LRP1-204ENST00000553277 SH2B1Q9NRF2 756 aaPredicted RBP22.2■■□□□ 1.14
LRP1-204ENST00000553277 IQSEC3Q9UPP2 1182 aaPredicted RBP22.2■■□□□ 1.14
LRP1-204ENST00000553277 ADD2P35612 726 aa22.19■■□□□ 1.14
LRP1-204ENST00000553277 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
LRP1-204ENST00000553277 VPS33BQ9H267 617 aa22.19■■□□□ 1.14
LRP1-204ENST00000553277 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
LRP1-204ENST00000553277 MAP3K12Q12852 859 aa22.18■■□□□ 1.14
LRP1-204ENST00000553277 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
LRP1-204ENST00000553277 WDR66Q8TBY9 1149 aa22.18■■□□□ 1.14
LRP1-204ENST00000553277 ALDH8A1Q9H2A2 487 aaPredicted RBP22.18■■□□□ 1.14
LRP1-204ENST00000553277 FAM205AQ6ZU69 1335 aa22.18■■□□□ 1.14
LRP1-204ENST00000553277 CHD4Q14839 1912 aa22.18■■□□□ 1.14
LRP1-204ENST00000553277 TCRBV5S4A2TA0A5A2 114 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 CHGBP05060 677 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 AK2P54819 239 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 ZSCAN23Q3MJ62 389 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 KLHL34Q8N239 644 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 APPBP2Q92624 585 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 PDE6AP16499 860 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 PTH1RQ03431 593 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 KIAA2012Q0VF49 1180 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 SLC9C2Q5TAH2 1124 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 GPT2Q8TD30 523 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 CYP46A1Q9Y6A2 500 aa22.17■■□□□ 1.14
LRP1-204ENST00000553277 IDH1O75874 414 aaKnown RBP22.16■■□□□ 1.14
LRP1-204ENST00000553277 PSMA5P28066 241 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 TSGA10IPQ3SY00 556 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 RUFY3Q7L099 469 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 PODNQ7Z5L7 613 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 TMEM87AQ8NBN3 555 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 OSBP2Q969R2 916 aa22.16■■□□□ 1.14
LRP1-204ENST00000553277 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
LRP1-204ENST00000553277 RNF20Q5VTR2 975 aa22.15■■□□□ 1.14
LRP1-204ENST00000553277 CAVIN1Q6NZI2 390 aaKnown RBP22.15■■□□□ 1.14
LRP1-204ENST00000553277 WWC3Q9ULE0 1092 aa22.15■■□□□ 1.14
LRP1-204ENST00000553277 RPAP1Q9BWH6 1393 aaPredicted RBP22.15■■□□□ 1.14
LRP1-204ENST00000553277 FER1L6Q2WGJ9 1857 aa22.14■■□□□ 1.14
LRP1-204ENST00000553277 CASTP20810 708 aaKnown RBP22.14■■□□□ 1.14
LRP1-204ENST00000553277 ZNF589Q86UQ0 364 aaPredicted RBP22.14■■□□□ 1.14
LRP1-204ENST00000553277 PPP1R9BQ96SB3 815 aa22.14■■□□□ 1.14
LRP1-204ENST00000553277 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.14
LRP1-204ENST00000553277 LRP2BPQ9P2M1 347 aa22.14■■□□□ 1.14
LRP1-204ENST00000553277 PPP1R1BQ9UD71 204 aaPredicted RBP22.14■■□□□ 1.14
LRP1-204ENST00000553277 CCDC173Q0VFZ6 552 aa22.14■■□□□ 1.13
LRP1-204ENST00000553277 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.13
LRP1-204ENST00000553277 SPTY2D1Q68D10 685 aaPredicted RBP22.14■■□□□ 1.13
LRP1-204ENST00000553277 SEC62Q99442 399 aaKnown RBP22.14■■□□□ 1.13
LRP1-204ENST00000553277 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
LRP1-204ENST00000553277 RBM8AQ9Y5S9 174 aaKnown RBP22.14■■□□□ 1.13
LRP1-204ENST00000553277 ARFGEF1Q9Y6D6 1849 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 RIMBP2O15034 1052 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 MAST3O60307 1309 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
LRP1-204ENST00000553277 SLFNL1Q499Z3 407 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 TBC1D22AQ8WUA7 517 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 ZNF532Q9HCE3 1301 aa22.13■■□□□ 1.13
LRP1-204ENST00000553277 NASPP49321 788 aaPredicted RBP22.12■■□□□ 1.13
LRP1-204ENST00000553277 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
LRP1-204ENST00000553277 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
LRP1-204ENST00000553277 ANP32BQ92688 251 aaKnown RBP22.12■■□□□ 1.13
LRP1-204ENST00000553277 JAKMIP1Q96N16 626 aaKnown RBP22.12■■□□□ 1.13
LRP1-204ENST00000553277 PUS7LQ9H0K6 701 aaKnown RBP22.12■■□□□ 1.13
LRP1-204ENST00000553277 ABCF2Q9UG63 623 aa22.12■■□□□ 1.13
LRP1-204ENST00000553277 ATP6V1DQ9Y5K8 247 aa22.12■■□□□ 1.13
LRP1-204ENST00000553277 ANKRD1Q15327 319 aa22.11■■□□□ 1.13
LRP1-204ENST00000553277 NOL8Q76FK4 1167 aaKnown RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 MAGEB6Q8N7X4 407 aa22.11■■□□□ 1.13
LRP1-204ENST00000553277 SYAP1Q96A49 352 aaPredicted RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 NSUN4Q96CB9 384 aaKnown RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
LRP1-204ENST00000553277 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
LRP1-204ENST00000553277 LTBP3Q9NS15 1303 aa22.11■■□□□ 1.13
LRP1-204ENST00000553277 ZSCAN22P10073 491 aaPredicted RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 NCLP19338 710 aaKnown RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 CHAF1AQ13111 956 aaPredicted RBP22.11■■□□□ 1.13
LRP1-204ENST00000553277 SMC3Q9UQE7 1217 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms