RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.63□□□□□ -0.07
SUPT16H-202ENST00000552829 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 GJB1P08034 283 aa14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 CTGFP29279 349 aa14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 GJA8P48165 433 aa14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 CASP7P55210 303 aa14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 NKX2-3Q8TAU0 364 aa14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 ZNF70Q9UC06 446 aaPredicted RBP14.62□□□□□ -0.07
SUPT16H-202ENST00000552829 PI4KAP2A4QPH2 592 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 SPDYE5A6NIY4 337 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 NEURL1BA8MQ27 555 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 BTBD19C9JJ37 291 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 TNFAIP1Q13829 316 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 KIF22Q14807 665 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 CWF19L2Q2TBE0 894 aaKnown RBP14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 C17orf99Q6UX52 265 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 PI4KAP1Q8N8J0 262 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 C8orf58Q8NAV2 365 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 FAM205AQ6ZU69 1335 aa14.61□□□□□ -0.07
SUPT16H-202ENST00000552829 CETPP11597 493 aa14.6□□□□□ -0.07
SUPT16H-202ENST00000552829 KCNJ4P48050 445 aa14.6□□□□□ -0.07
SUPT16H-202ENST00000552829 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
SUPT16H-202ENST00000552829 TRIM47Q96LD4 638 aa14.6□□□□□ -0.07
SUPT16H-202ENST00000552829 IFT57Q9NWB7 429 aa14.6□□□□□ -0.07
SUPT16H-202ENST00000552829 ALPK3Q96L96 1907 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 TAF5LO75529 589 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 GRK4P32298 578 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 RALBP1Q15311 655 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 CCDC30Q5VVM6 783 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 TMEM39BQ9GZU3 492 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 TDRD3Q9H7E2 651 aaKnown RBP14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 CSADQ9Y600 493 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 SNCAIPQ9Y6H5 919 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
SUPT16H-202ENST00000552829 WDHD1O75717 1129 aaPredicted RBP14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 CCL5P13501 91 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 OSBPP22059 807 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 RBM5P52756 815 aaKnown RBP eCLIP14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 GNAI1P63096 354 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 NEXNQ0ZGT2 675 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 ZNF804AQ7Z570 1209 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 DZIP1LQ8IYY4 767 aaKnown RBP14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 HELBQ8NG08 1087 aaPredicted RBP14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 RIPOR2Q9Y4F9 1068 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 MGAMO43451 1857 aa14.58□□□□□ -0.08
SUPT16H-202ENST00000552829 IRF6O14896 467 aa14.57□□□□□ -0.08
SUPT16H-202ENST00000552829 PSMC4P43686 418 aa14.57□□□□□ -0.08
SUPT16H-202ENST00000552829 GCKRQ14397 625 aa14.57□□□□□ -0.08
SUPT16H-202ENST00000552829 CHMP4AQ9BY43 222 aa14.57□□□□□ -0.08
SUPT16H-202ENST00000552829 JAG2Q9Y219 1238 aa14.57□□□□□ -0.08
SUPT16H-202ENST00000552829 FARP2O94887 1054 aaPredicted RBP14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 PPIL2Q13356 520 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 SNAPC2Q13487 334 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 TSPYL6Q8N831 410 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 TDRD7Q8NHU6 1098 aaKnown RBP14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 RNF208Q9H0X6 261 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 ADAMTS8Q9UP79 889 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
SUPT16H-202ENST00000552829 TCP10L2B9ZVM9 353 aa14.55□□□□□ -0.08
SUPT16H-202ENST00000552829 HOXD10P28358 340 aa14.55□□□□□ -0.08
SUPT16H-202ENST00000552829 U2AF1L4Q8WU68 220 aaKnown RBP14.55□□□□□ -0.08
SUPT16H-202ENST00000552829 CPA4Q9UI42 421 aa14.55□□□□□ -0.08
SUPT16H-202ENST00000552829 TTF2Q9UNY4 1162 aaKnown RBP14.55□□□□□ -0.08
SUPT16H-202ENST00000552829 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 ANKRD18BA2A2Z9 1011 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 SGPL1O95470 568 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 TNNI2P48788 182 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 MOGSQ13724 837 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 MFSD14BQ5SR56 506 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 G2E3Q7L622 706 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 RAET1EQ8TD07 263 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 STAP2Q9UGK3 403 aa14.54□□□□□ -0.08
SUPT16H-202ENST00000552829 CACNA1FO60840 1977 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 MYPNQ86TC9 1320 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 CAPN2P17655 700 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 BMP8BP34820 402 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 CRKP46108 304 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 FOXO4P98177 505 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 ZKSCAN4Q969J2 545 aaPredicted RBP14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 UNC93B1Q9H1C4 597 aa14.53□□□□□ -0.08
SUPT16H-202ENST00000552829 FMNL1O95466 1100 aaPredicted RBP14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 BCRP11274 1271 aa14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 UBXN2AP68543 259 aa14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 CALD1Q05682 793 aaKnown RBP14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 PPATQ06203 517 aa14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 GRIK5Q16478 980 aa14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 FKBP1CQ5VVH2 108 aa14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
SUPT16H-202ENST00000552829 WRNIP1Q96S55 665 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms