RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
LINC00661-207ENST00000552685 DZIP1LQ8IYY4 767 aaKnown RBP12.47□□□□□ -0.41
LINC00661-207ENST00000552685 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
LINC00661-207ENST00000552685 CFHR5Q9BXR6 569 aa12.47□□□□□ -0.41
LINC00661-207ENST00000552685 TMEM39BQ9GZU3 492 aa12.47□□□□□ -0.41
LINC00661-207ENST00000552685 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
LINC00661-207ENST00000552685 MANSC4A6NHS7 340 aaPredicted RBP12.46□□□□□ -0.41
LINC00661-207ENST00000552685 IREB2P48200 963 aaKnown RBP12.46□□□□□ -0.41
LINC00661-207ENST00000552685 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
LINC00661-207ENST00000552685 VGLL2Q8N8G2 317 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 TEPSINQ96N21 525 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 USP44Q9H0E7 712 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 ELP3Q9H9T3 547 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
LINC00661-207ENST00000552685 PTPRCP08575 1304 aa12.45□□□□□ -0.42
LINC00661-207ENST00000552685 E9PSI1 815 aa12.45□□□□□ -0.42
LINC00661-207ENST00000552685 FRAT2O75474 233 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-207ENST00000552685 PDE8BO95263 885 aa12.45□□□□□ -0.42
LINC00661-207ENST00000552685 SLFN5Q08AF3 891 aa12.45□□□□□ -0.42
LINC00661-207ENST00000552685 ZBTB48P10074 688 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-207ENST00000552685 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-207ENST00000552685 CRHR2Q13324 411 aa12.44□□□□□ -0.42
LINC00661-207ENST00000552685 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
LINC00661-207ENST00000552685 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
LINC00661-207ENST00000552685 FBXO46Q6PJ61 603 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-207ENST00000552685 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
LINC00661-207ENST00000552685 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
LINC00661-207ENST00000552685 PTPN18Q99952 460 aa12.44□□□□□ -0.42
LINC00661-207ENST00000552685 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 INHBEP58166 350 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-207ENST00000552685 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 TRIM17Q9Y577 477 aa12.43□□□□□ -0.42
LINC00661-207ENST00000552685 FGFR2P21802 821 aa12.42□□□□□ -0.42
LINC00661-207ENST00000552685 VGLL4Q14135 290 aa12.42□□□□□ -0.42
LINC00661-207ENST00000552685 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
LINC00661-207ENST00000552685 SIL1Q9H173 461 aa12.42□□□□□ -0.42
LINC00661-207ENST00000552685 RBBP6Q7Z6E9 1792 aaKnown RBP12.42□□□□□ -0.42
LINC00661-207ENST00000552685 EYA2O00167 538 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
LINC00661-207ENST00000552685 TNNI2P48788 182 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 PUM3Q15397 648 aaKnown RBP12.41□□□□□ -0.42
LINC00661-207ENST00000552685 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
LINC00661-207ENST00000552685 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
LINC00661-207ENST00000552685 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 CCL15-CCL14A0A0B4J2E2 113 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 UNCXA6NJT0 531 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
LINC00661-207ENST00000552685 CCL15Q16663 113 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00661-207ENST00000552685 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
LINC00661-207ENST00000552685 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
LINC00661-207ENST00000552685 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-207ENST00000552685 SLC5A1P13866 664 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 OTUD7BQ6GQQ9 843 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-207ENST00000552685 PA2G4Q9UQ80 394 aaKnown RBP12.39□□□□□ -0.43
LINC00661-207ENST00000552685 CSADQ9Y600 493 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
LINC00661-207ENST00000552685 KIAA0100Q14667 2235 aaKnown RBP12.39□□□□□ -0.43
LINC00661-207ENST00000552685 UBTFL1P0CB47 393 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-207ENST00000552685 SP3Q02447 781 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 TRMT2AQ8IZ69 625 aaKnown RBP12.38□□□□□ -0.43
LINC00661-207ENST00000552685 LPIN2Q92539 896 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 WRNIP1Q96S55 665 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
LINC00661-207ENST00000552685 LRRFIP2Q9Y608 721 aaKnown RBP12.38□□□□□ -0.43
LINC00661-207ENST00000552685 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-207ENST00000552685 PRDX5P30044 214 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 ADORA1P30542 326 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 GTF2A2P52657 109 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 TCP10Q12799 353 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-207ENST00000552685 ATP2B3Q16720 1220 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
LINC00661-207ENST00000552685 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
LINC00661-207ENST00000552685 INPP5BP32019 993 aa12.36□□□□□ -0.43
LINC00661-207ENST00000552685 PHKA1P46020 1223 aa12.36□□□□□ -0.43
LINC00661-207ENST00000552685 NFIAQ12857 509 aa12.36□□□□□ -0.43
LINC00661-207ENST00000552685 CDC42EP5Q6NZY7 148 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms