RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 FAM84BQ96KN1 310 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-222ENST00000552465 PTCH2Q9Y6C5 1203 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 FANCIQ9NVI1 1328 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 RBBP6Q7Z6E9 1792 aaKnown RBP21.44■■□□□ 1.02
CACNB3-222ENST00000552465 GYG1P46976 350 aa21.44■■□□□ 1.02
CACNB3-222ENST00000552465 FXR1P51114 621 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNB3-222ENST00000552465 SLC9C1Q4G0N8 1177 aa21.44■■□□□ 1.02
CACNB3-222ENST00000552465 CCDC184Q52MB2 194 aa21.44■■□□□ 1.02
CACNB3-222ENST00000552465 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
CACNB3-222ENST00000552465 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
CACNB3-222ENST00000552465 TMEM39BQ9GZU3 492 aa21.44■■□□□ 1.02
CACNB3-222ENST00000552465 GRM8O00222 908 aa21.43■■□□□ 1.02
CACNB3-222ENST00000552465 CRKP46108 304 aa21.43■■□□□ 1.02
CACNB3-222ENST00000552465 TNNI2P48788 182 aa21.43■■□□□ 1.02
CACNB3-222ENST00000552465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.43■■□□□ 1.02
CACNB3-222ENST00000552465 CSADQ9Y600 493 aa21.43■■□□□ 1.02
CACNB3-222ENST00000552465 KIAA0100Q14667 2235 aaKnown RBP21.43■■□□□ 1.02
CACNB3-222ENST00000552465 OTUD5Q96G74 571 aa21.42■■□□□ 1.02
CACNB3-222ENST00000552465 HTTP42858 3142 aa21.42■■□□□ 1.02
CACNB3-222ENST00000552465 EXOSC9Q06265 439 aaKnown RBP21.41■■□□□ 1.02
CACNB3-222ENST00000552465 SLC4A8Q2Y0W8 1093 aa21.41■■□□□ 1.02
CACNB3-222ENST00000552465 COLQQ9Y215 455 aaPredicted RBP21.41■■□□□ 1.02
CACNB3-222ENST00000552465 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
CACNB3-222ENST00000552465 GRIK5Q16478 980 aa21.4■■□□□ 1.02
CACNB3-222ENST00000552465 PUS3Q9BZE2 481 aaKnown RBP21.4■■□□□ 1.02
CACNB3-222ENST00000552465 C9orf78Q9NZ63 289 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-222ENST00000552465 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
CACNB3-222ENST00000552465 TLR2O60603 784 aa21.39■■□□□ 1.01
CACNB3-222ENST00000552465 OTOFQ9HC10 1997 aa21.39■■□□□ 1.01
CACNB3-222ENST00000552465 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
CACNB3-222ENST00000552465 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
CACNB3-222ENST00000552465 CETPP11597 493 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 HDLBPQ00341 1268 aaKnown RBP21.38■■□□□ 1.01
CACNB3-222ENST00000552465 FBXO33Q7Z6M2 555 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 WDR63Q8IWG1 891 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 ARHGAP39Q9C0H5 1083 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 RIPOR2Q9Y4F9 1068 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 SNCAIPQ9Y6H5 919 aa21.38■■□□□ 1.01
CACNB3-222ENST00000552465 ALDH1L1O75891 902 aa21.37■■□□□ 1.01
CACNB3-222ENST00000552465 CACNB3P54284 484 aa21.37■■□□□ 1.01
CACNB3-222ENST00000552465 LACTBP83111 547 aaPredicted RBP21.37■■□□□ 1.01
CACNB3-222ENST00000552465 KIF22Q14807 665 aa21.37■■□□□ 1.01
CACNB3-222ENST00000552465 ERO1BQ86YB8 467 aa21.37■■□□□ 1.01
CACNB3-222ENST00000552465 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
CACNB3-222ENST00000552465 ZCCHC17Q9NP64 241 aaKnown RBP21.37■■□□□ 1.01
CACNB3-222ENST00000552465 BTBD19C9JJ37 291 aa21.36■■□□□ 1.01
CACNB3-222ENST00000552465 IQSEC3Q9UPP2 1182 aaPredicted RBP21.36■■□□□ 1.01
CACNB3-222ENST00000552465 MROH5Q6ZUA9 1318 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 H0YGN5 161 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 IRF6O14896 467 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 GNRH1P01148 92 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 CHAF1AQ13111 956 aaPredicted RBP21.35■■□□□ 1.01
CACNB3-222ENST00000552465 SNAPC2Q13487 334 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 VPS37DQ86XT2 251 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
CACNB3-222ENST00000552465 TEKT1Q969V4 418 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 KAZALD1Q96I82 304 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 SUCLG2Q96I99 432 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 MRIQ9BWK5 157 aa21.35■■□□□ 1.01
CACNB3-222ENST00000552465 MKI67P46013 3256 aaKnown RBP21.35■■□□□ 1.01
CACNB3-222ENST00000552465 PRMT2P55345 433 aa21.34■■□□□ 1.01
CACNB3-222ENST00000552465 WRNIP1Q96S55 665 aa21.34■■□□□ 1.01
CACNB3-222ENST00000552465 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
CACNB3-222ENST00000552465 SALL2Q9Y467 1007 aaPredicted RBP21.34■■□□□ 1.01
CACNB3-222ENST00000552465 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
CACNB3-222ENST00000552465 PPIL2Q13356 520 aa21.33■■□□□ 1.01
CACNB3-222ENST00000552465 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
CACNB3-222ENST00000552465 FAM83AQ86UY5 434 aa21.33■■□□□ 1.01
CACNB3-222ENST00000552465 HOOK2Q96ED9 719 aa21.33■■□□□ 1.01
CACNB3-222ENST00000552465 ZDHHC15Q96MV8 337 aa21.33■■□□□ 1.01
CACNB3-222ENST00000552465 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
CACNB3-222ENST00000552465 CAVIN4Q5BKX8 364 aa21.32■■□□□ 1
CACNB3-222ENST00000552465 FKBP1CQ5VVH2 108 aa21.32■■□□□ 1
CACNB3-222ENST00000552465 APOBEC3HQ6NTF7 200 aaKnown RBP21.32■■□□□ 1
CACNB3-222ENST00000552465 TMOD2Q9NZR1 351 aa21.32■■□□□ 1
CACNB3-222ENST00000552465 NBPF7P0C2Y1 421 aaPredicted RBP21.31■■□□□ 1
CACNB3-222ENST00000552465 C17orf99Q6UX52 265 aa21.31■■□□□ 1
CACNB3-222ENST00000552465 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
CACNB3-222ENST00000552465 ARAP2Q8WZ64 1704 aa21.31■■□□□ 1
CACNB3-222ENST00000552465 PPATQ06203 517 aa21.3■■□□□ 1
CACNB3-222ENST00000552465 LRRC24Q50LG9 513 aa21.3■■□□□ 1
CACNB3-222ENST00000552465 METTL24Q5JXM2 366 aa21.3■■□□□ 1
CACNB3-222ENST00000552465 DCAF15Q66K64 600 aa21.3■■□□□ 1
CACNB3-222ENST00000552465 UTYO14607 1347 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 PDE8BO95263 885 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 CTGFP29279 349 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 BCAMP50895 628 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 MTFR1Q15390 333 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 RABL6Q3YEC7 729 aaPredicted RBP21.29■■□□□ 1
CACNB3-222ENST00000552465 VGLL2Q8N8G2 317 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 CPA4Q9UI42 421 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
CACNB3-222ENST00000552465 ECM2O94769 699 aaPredicted RBP21.28■■□□□ 1
CACNB3-222ENST00000552465 PSMC4P43686 418 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 HHIPL2Q6UWX4 724 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 MIGA2Q7L4E1 593 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 ANKRD23Q86SG2 305 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.28■■□□□ 1
CACNB3-222ENST00000552465 SHISA4Q96DD7 197 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms