RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
CHPT1-209ENST00000552329 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.69
CHPT1-209ENST00000552329 POU4F3Q15319 338 aa10.71□□□□□ -0.69
CHPT1-209ENST00000552329 SOX17Q9H6I2 414 aaPredicted RBP10.71□□□□□ -0.69
CHPT1-209ENST00000552329 C12orf49Q9H741 205 aa10.71□□□□□ -0.69
CHPT1-209ENST00000552329 GNA15P30679 374 aa10.7□□□□□ -0.7
CHPT1-209ENST00000552329 GSTT1P30711 240 aa10.7□□□□□ -0.7
CHPT1-209ENST00000552329 PTPN12Q05209 780 aaKnown RBP10.7□□□□□ -0.7
CHPT1-209ENST00000552329 FBXO33Q7Z6M2 555 aa10.7□□□□□ -0.7
CHPT1-209ENST00000552329 UBL7Q96S82 380 aaPredicted RBP10.7□□□□□ -0.7
CHPT1-209ENST00000552329 CORO1BQ9BR76 489 aa10.69□□□□□ -0.7
CHPT1-209ENST00000552329 CYP11A1P05108 521 aa10.68□□□□□ -0.7
CHPT1-209ENST00000552329 EIF4BP23588 611 aaKnown RBP10.68□□□□□ -0.7
CHPT1-209ENST00000552329 COL19A1Q14993 1142 aa10.68□□□□□ -0.7
CHPT1-209ENST00000552329 BCL2L13Q9BXK5 485 aa10.68□□□□□ -0.7
CHPT1-209ENST00000552329 NRSN2Q9GZP1 204 aa10.68□□□□□ -0.7
CHPT1-209ENST00000552329 RNF208Q9H0X6 261 aa10.68□□□□□ -0.7
CHPT1-209ENST00000552329 XRCC5P13010 732 aaKnown RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 DRD2P14416 443 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 PSMD2Q13200 908 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 PDE3AQ14432 1141 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 RPS26P11Q5JNZ5 115 aaPredicted RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 NUTM2GQ5VZR2 741 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 FDX2Q6P4F2 183 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 C12orf50Q8NA57 414 aaPredicted RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 DDX54Q8TDD1 881 aaKnown RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 STK35Q8TDR2 534 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 GIPC2Q8TF65 315 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
CHPT1-209ENST00000552329 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
CHPT1-209ENST00000552329 CCDC180Q9P1Z9 1646 aa10.66□□□□□ -0.7
CHPT1-209ENST00000552329 PREPP48147 710 aa10.66□□□□□ -0.7
CHPT1-209ENST00000552329 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
CHPT1-209ENST00000552329 FAM8A1Q9UBU6 413 aa10.66□□□□□ -0.7
CHPT1-209ENST00000552329 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
CHPT1-209ENST00000552329 GIPC1O14908 333 aa10.65□□□□□ -0.7
CHPT1-209ENST00000552329 SART1O43290 800 aaKnown RBP10.65□□□□□ -0.7
CHPT1-209ENST00000552329 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
CHPT1-209ENST00000552329 RSPO4Q2I0M5 234 aaPredicted RBP10.65□□□□□ -0.7
CHPT1-209ENST00000552329 SRCIN1Q9C0H9 1055 aa10.65□□□□□ -0.7
CHPT1-209ENST00000552329 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
CHPT1-209ENST00000552329 AK5Q9Y6K8 562 aa10.65□□□□□ -0.7
CHPT1-209ENST00000552329 PAGE1O75459 146 aa10.64□□□□□ -0.71
CHPT1-209ENST00000552329 AKAP4Q5JQC9 854 aa10.64□□□□□ -0.71
CHPT1-209ENST00000552329 TMPRSS13Q9BYE2 586 aa10.64□□□□□ -0.71
CHPT1-209ENST00000552329 CEP41Q9BYV8 373 aa10.64□□□□□ -0.71
CHPT1-209ENST00000552329 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
CHPT1-209ENST00000552329 CELA3AP09093 270 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 ERCC3P19447 782 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 EXOSC6Q5RKV6 272 aaKnown RBP10.63□□□□□ -0.71
CHPT1-209ENST00000552329 Q6ZS46 218 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 SULF2Q8IWU5 870 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 KCNB2Q92953 911 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 UTP4Q969X6 686 aaKnown RBP10.63□□□□□ -0.71
CHPT1-209ENST00000552329 ZFYVE1Q9HBF4 777 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 RAD18Q9NS91 495 aa10.63□□□□□ -0.71
CHPT1-209ENST00000552329 ENC1O14682 589 aa10.62□□□□□ -0.71
CHPT1-209ENST00000552329 LIG1P18858 919 aa10.62□□□□□ -0.71
CHPT1-209ENST00000552329 AP3B2Q13367 1082 aa10.62□□□□□ -0.71
CHPT1-209ENST00000552329 NKAPLQ5M9Q1 402 aa10.62□□□□□ -0.71
CHPT1-209ENST00000552329 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
CHPT1-209ENST00000552329 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
CHPT1-209ENST00000552329 NECAB3Q96P71 396 aaPredicted RBP10.62□□□□□ -0.71
CHPT1-209ENST00000552329 CCDC86Q9H6F5 360 aaKnown RBP10.62□□□□□ -0.71
CHPT1-209ENST00000552329 DAB2P98082 770 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 FGD1P98174 961 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 ANKRD34AQ69YU3 496 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 MPRIPQ6WCQ1 1025 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 ARMC10Q8N2F6 343 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 FRMD6Q96NE9 622 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 CYP4F12Q9HCS2 524 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 VTI1BQ9UEU0 232 aa10.61□□□□□ -0.71
CHPT1-209ENST00000552329 ABCC9O60706 1549 aa10.6□□□□□ -0.71
CHPT1-209ENST00000552329 MEGF11A6BM72 1044 aa10.6□□□□□ -0.71
CHPT1-209ENST00000552329 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
CHPT1-209ENST00000552329 DYRK3O43781 588 aa10.6□□□□□ -0.71
CHPT1-209ENST00000552329 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
CHPT1-209ENST00000552329 GSTP1P09211 210 aaKnown RBP10.6□□□□□ -0.71
CHPT1-209ENST00000552329 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
CHPT1-209ENST00000552329 KCNF1Q9H3M0 494 aa10.6□□□□□ -0.71
CHPT1-209ENST00000552329 BMP3P12645 472 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 MAP3K11Q16584 847 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 RASIP1Q5U651 963 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 FAM46AQ96IP4 442 aaKnown RBP10.59□□□□□ -0.71
CHPT1-209ENST00000552329 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
CHPT1-209ENST00000552329 AOC2O75106 756 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 NME2P22392 152 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 ARNTP27540 789 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 SGO2Q562F6 1265 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 SMG8Q8ND04 991 aaKnown RBP10.58□□□□□ -0.72
CHPT1-209ENST00000552329 CEP44Q9C0F1 390 aa10.58□□□□□ -0.72
CHPT1-209ENST00000552329 SORBS3O60504 671 aa10.57□□□□□ -0.72
CHPT1-209ENST00000552329 CTSHP09668 335 aa10.57□□□□□ -0.72
CHPT1-209ENST00000552329 RXRBP28702 533 aa10.57□□□□□ -0.72
CHPT1-209ENST00000552329 SOX4Q06945 474 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms