RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 SPATA31A1Q5TZJ5 1347 aa10.53□□□□□ -0.72
BEST3-211ENST00000552295 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.72
BEST3-211ENST00000552295 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
BEST3-211ENST00000552295 ARAFP10398 606 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 BAG6P46379 1132 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 SCNN1DP51172 638 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
BEST3-211ENST00000552295 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 ZCCHC2Q9C0B9 1178 aaKnown RBP10.52□□□□□ -0.73
BEST3-211ENST00000552295 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 MAP3K5Q99683 1374 aa10.52□□□□□ -0.73
BEST3-211ENST00000552295 EPXP11678 715 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 IL2RBP14784 551 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 VPS72Q15906 364 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 BTBD6Q96KE9 485 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 DNAAF2Q9NVR5 837 aaKnown RBP10.51□□□□□ -0.73
BEST3-211ENST00000552295 USP21Q9UK80 565 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 AFF2P51816 1311 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 GLI3P10071 1580 aa10.51□□□□□ -0.73
BEST3-211ENST00000552295 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
BEST3-211ENST00000552295 GNB5O14775 395 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
BEST3-211ENST00000552295 ATP4AP20648 1035 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 SMTNP53814 917 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
BEST3-211ENST00000552295 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 SPG7Q9UQ90 795 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 THRAP3Q9Y2W1 955 aaKnown RBP10.5□□□□□ -0.73
BEST3-211ENST00000552295 THSD7AQ9UPZ6 1657 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 ATRNO75882 1429 aa10.5□□□□□ -0.73
BEST3-211ENST00000552295 NEURL1BA8MQ27 555 aa10.49□□□□□ -0.73
BEST3-211ENST00000552295 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
BEST3-211ENST00000552295 ATXN7O15265 892 aaPredicted RBP10.49□□□□□ -0.73
BEST3-211ENST00000552295 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
BEST3-211ENST00000552295 CENPBP07199 599 aaPredicted RBP10.49□□□□□ -0.73
BEST3-211ENST00000552295 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
BEST3-211ENST00000552295 AKAP4Q5JQC9 854 aa10.49□□□□□ -0.73
BEST3-211ENST00000552295 PLPP7Q8NBV4 271 aa10.49□□□□□ -0.73
BEST3-211ENST00000552295 THUMPD2Q9BTF0 503 aaKnown RBP10.49□□□□□ -0.73
BEST3-211ENST00000552295 CYP27B1O15528 508 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 ABL2P42684 1182 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 SLFN5Q08AF3 891 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 MCM10Q7L590 875 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
BEST3-211ENST00000552295 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 CCDC9Q9Y3X0 531 aaKnown RBP10.48□□□□□ -0.73
BEST3-211ENST00000552295 IL16Q14005 1332 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 CEMIPQ8WUJ3 1361 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 TNS2Q63HR2 1409 aa10.48□□□□□ -0.73
BEST3-211ENST00000552295 TOGARAM1Q9Y4F4 1720 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 E9PSI1 815 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 PHKG2P15735 406 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 ARSJQ5FYB0 599 aaPredicted RBP10.47□□□□□ -0.73
BEST3-211ENST00000552295 C1orf141Q5JVX7 400 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 XP32Q5T750 250 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 IL17REQ8NFR9 667 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 ZCRB1Q8TBF4 217 aaKnown RBP10.47□□□□□ -0.73
BEST3-211ENST00000552295 RTF1Q92541 710 aaKnown RBP10.47□□□□□ -0.73
BEST3-211ENST00000552295 SERTAD1Q9UHV2 236 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 KDM6AO15550 1401 aaPredicted RBP10.47□□□□□ -0.73
BEST3-211ENST00000552295 MRC1P22897 1456 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 KDM3BQ7LBC6 1761 aa10.47□□□□□ -0.73
BEST3-211ENST00000552295 A0A1W2PNR3 127 aa10.46□□□□□ -0.73
BEST3-211ENST00000552295 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
BEST3-211ENST00000552295 SEMA3FQ13275 785 aa10.46□□□□□ -0.73
BEST3-211ENST00000552295 DUSP27Q5VZP5 1158 aa10.46□□□□□ -0.73
BEST3-211ENST00000552295 IFNL2Q8IZJ0 200 aa10.46□□□□□ -0.73
BEST3-211ENST00000552295 NOP53Q9NZM5 478 aaKnown RBP10.46□□□□□ -0.73
BEST3-211ENST00000552295 TRPC5Q9UL62 973 aaPredicted RBP10.46□□□□□ -0.73
BEST3-211ENST00000552295 DCDC2BA2VCK2 349 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
BEST3-211ENST00000552295 ZNF853P0CG23 659 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 MAPTP10636 758 aaKnown RBP10.45□□□□□ -0.74
BEST3-211ENST00000552295 ADH6P28332 368 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 DGKGP49619 791 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 FAM182BQ5T319 152 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
BEST3-211ENST00000552295 ITGB4P16144 1822 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 DOT1LQ8TEK3 1739 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 FANCIQ9NVI1 1328 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 KHNYNO15037 678 aaKnown RBP10.44□□□□□ -0.74
BEST3-211ENST00000552295 FURINP09958 794 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 CD33P20138 364 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 SOX11P35716 441 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 TNP2Q05952 138 aa10.44□□□□□ -0.74
BEST3-211ENST00000552295 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms