RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 VEZTQ9HBM0 779 aa20.29■□□□□ 0.84
CALCOCO1-220ENST00000552282 FZD1Q9UP38 647 aa20.29■□□□□ 0.84
CALCOCO1-220ENST00000552282 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
CALCOCO1-220ENST00000552282 IGF2BP3O00425 579 aaKnown RBP eCLIP20.28■□□□□ 0.84
CALCOCO1-220ENST00000552282 ZBTB22O15209 634 aa20.28■□□□□ 0.84
CALCOCO1-220ENST00000552282 SOX10P56693 466 aa20.28■□□□□ 0.84
CALCOCO1-220ENST00000552282 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
CALCOCO1-220ENST00000552282 JAG2Q9Y219 1238 aa20.28■□□□□ 0.84
CALCOCO1-220ENST00000552282 RPAP1Q9BWH6 1393 aaPredicted RBP20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 FGFR2P21802 821 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 GJA5P36382 358 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 CRKP46108 304 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
CALCOCO1-220ENST00000552282 RBM5P52756 815 aaKnown RBP eCLIP20.26■□□□□ 0.83
CALCOCO1-220ENST00000552282 SLFN5Q08AF3 891 aa20.26■□□□□ 0.83
CALCOCO1-220ENST00000552282 FKBP1CQ5VVH2 108 aa20.26■□□□□ 0.83
CALCOCO1-220ENST00000552282 TDRD3Q9H7E2 651 aaKnown RBP20.26■□□□□ 0.83
CALCOCO1-220ENST00000552282 BRCA2P51587 3418 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 ZDHHC15Q96MV8 337 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 MKI67P46013 3256 aaKnown RBP20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 MAST3O60307 1309 aa20.25■□□□□ 0.83
CALCOCO1-220ENST00000552282 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 TNNI2P48788 182 aa20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 TRMT2AQ8IZ69 625 aaKnown RBP20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
CALCOCO1-220ENST00000552282 GRIK5Q16478 980 aa20.23■□□□□ 0.83
CALCOCO1-220ENST00000552282 OTUD7BQ6GQQ9 843 aa20.23■□□□□ 0.83
CALCOCO1-220ENST00000552282 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.23■□□□□ 0.83
CALCOCO1-220ENST00000552282 VPS37DQ86XT2 251 aa20.23■□□□□ 0.83
CALCOCO1-220ENST00000552282 MS4A4AQ96JQ5 239 aa20.23■□□□□ 0.83
CALCOCO1-220ENST00000552282 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
CALCOCO1-220ENST00000552282 CDAN1Q8IWY9 1227 aa20.22■□□□□ 0.83
CALCOCO1-220ENST00000552282 TEKT1Q969V4 418 aa20.22■□□□□ 0.83
CALCOCO1-220ENST00000552282 PTPN18Q99952 460 aa20.22■□□□□ 0.83
CALCOCO1-220ENST00000552282 EYA2O00167 538 aa20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 HHIPL2Q6UWX4 724 aa20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 OPTNQ96CV9 577 aa20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 ERO1AQ96HE7 468 aa20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 TMEM39BQ9GZU3 492 aa20.21■□□□□ 0.83
CALCOCO1-220ENST00000552282 CRHR2Q13324 411 aa20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 VGLL4Q14135 290 aa20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 PRPF38BQ5VTL8 546 aaKnown RBP20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 APOBEC3HQ6NTF7 200 aaKnown RBP20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 LPIN2Q92539 896 aa20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
CALCOCO1-220ENST00000552282 SPDYE5A6NIY4 337 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 CIAO1O76071 339 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 BCAMP50895 628 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 MAP3K9P80192 1104 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 INTS3Q68E01 1043 aaKnown RBP20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 ATG9AQ7Z3C6 839 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 KLHDC4Q8TBB5 520 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 HOOK2Q96ED9 719 aa20.19■□□□□ 0.82
CALCOCO1-220ENST00000552282 TCP10L2B9ZVM9 353 aa20.18■□□□□ 0.82
CALCOCO1-220ENST00000552282 ELP3Q9H9T3 547 aa20.18■□□□□ 0.82
CALCOCO1-220ENST00000552282 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
CALCOCO1-220ENST00000552282 TRIM17Q9Y577 477 aa20.18■□□□□ 0.82
CALCOCO1-220ENST00000552282 GTF2A2P52657 109 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 CHAF1AQ13111 956 aaPredicted RBP20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 WDR66Q8TBY9 1149 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 BRI3BPQ8WY22 251 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 ARMC5Q96C12 935 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 CSADQ9Y600 493 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 SALL1Q9NSC2 1324 aa20.17■□□□□ 0.82
CALCOCO1-220ENST00000552282 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 SLC5A1P13866 664 aa20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 SP3Q02447 781 aa20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 TMOD2Q9NZR1 351 aa20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 PTPN22Q9Y2R2 807 aa20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 SNCAIPQ9Y6H5 919 aa20.16■□□□□ 0.82
CALCOCO1-220ENST00000552282 ERO1BQ86YB8 467 aa20.15■□□□□ 0.82
CALCOCO1-220ENST00000552282 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
CALCOCO1-220ENST00000552282 SEMA3EO15041 775 aa20.14■□□□□ 0.81
CALCOCO1-220ENST00000552282 CD99L2Q8TCZ2 262 aa20.14■□□□□ 0.81
CALCOCO1-220ENST00000552282 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
CALCOCO1-220ENST00000552282 HDAC5Q9UQL6 1122 aa20.14■□□□□ 0.81
CALCOCO1-220ENST00000552282 KIAA0100Q14667 2235 aaKnown RBP20.14■□□□□ 0.81
CALCOCO1-220ENST00000552282 PDS5AQ29RF7 1337 aaKnown RBP20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 CCL15-CCL14A0A0B4J2E2 113 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 UBTFL1P0CB47 393 aaPredicted RBP20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 CCL15Q16663 113 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 FAM151AQ8WW52 585 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 EFCC1Q9HA90 598 aa20.13■□□□□ 0.81
CALCOCO1-220ENST00000552282 RFX7Q2KHR2 1363 aa20.12■□□□□ 0.81
CALCOCO1-220ENST00000552282 CACNB3P54284 484 aa20.12■□□□□ 0.81
CALCOCO1-220ENST00000552282 CAP1Q01518 475 aa20.12■□□□□ 0.81
CALCOCO1-220ENST00000552282 PPIL2Q13356 520 aa20.12■□□□□ 0.81
CALCOCO1-220ENST00000552282 OTUD5Q96G74 571 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms