RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-225ENST00000551845 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-225ENST00000551845 APBB1O00213 710 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 ZBTB22O15209 634 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 CELF2O95319 508 aaKnown RBP13.05□□□□□ -0.32
PTCH1-225ENST00000551845 PHKA1P46020 1223 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
PTCH1-225ENST00000551845 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
PTCH1-225ENST00000551845 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
PTCH1-225ENST00000551845 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
PTCH1-225ENST00000551845 SCARF1Q14162 830 aa13.04□□□□□ -0.32
PTCH1-225ENST00000551845 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
PTCH1-225ENST00000551845 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
PTCH1-225ENST00000551845 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
PTCH1-225ENST00000551845 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-225ENST00000551845 CCDC8Q9H0W5 538 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-225ENST00000551845 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
PTCH1-225ENST00000551845 SUGT1Q9Y2Z0 365 aa13.04□□□□□ -0.32
PTCH1-225ENST00000551845 RBM5P52756 815 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTCH1-225ENST00000551845 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 TTC39AQ5SRH9 613 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 SAPCD2Q86UD0 394 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 AACSQ86V21 672 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 ZGPATQ8N5A5 531 aaKnown RBP13.03□□□□□ -0.32
PTCH1-225ENST00000551845 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 MRIQ9BWK5 157 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 BCL11AQ9H165 835 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
PTCH1-225ENST00000551845 EGFRP00533 1210 aa13.02□□□□□ -0.33
PTCH1-225ENST00000551845 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-225ENST00000551845 IFIT2P09913 472 aaKnown RBP13.02□□□□□ -0.33
PTCH1-225ENST00000551845 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
PTCH1-225ENST00000551845 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
PTCH1-225ENST00000551845 ZNF609O15014 1411 aa13.02□□□□□ -0.33
PTCH1-225ENST00000551845 WNT10BO00744 389 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 MYO1BO43795 1136 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 SOX10P56693 466 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 HDLBPQ00341 1268 aaKnown RBP13.01□□□□□ -0.33
PTCH1-225ENST00000551845 RASGRF1Q13972 1273 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-225ENST00000551845 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 MTMR14Q8NCE2 650 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-225ENST00000551845 GLIS2Q9BZE0 524 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-225ENST00000551845 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-225ENST00000551845 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
PTCH1-225ENST00000551845 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 USP48Q86UV5 1035 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 SULF1Q8IWU6 871 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 HHIPL1Q96JK4 782 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 PRMT6Q96LA8 375 aaPredicted RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 HMG20BQ9P0W2 317 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 ABCF2Q9UG63 623 aa13□□□□□ -0.33
PTCH1-225ENST00000551845 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
PTCH1-225ENST00000551845 MAST3O60307 1309 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 PDS5AQ29RF7 1337 aaKnown RBP12.99□□□□□ -0.33
PTCH1-225ENST00000551845 CRKP46108 304 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-225ENST00000551845 GRIK5Q16478 980 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 ERICH6Q7L0X2 663 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 TEKT1Q969V4 418 aa12.99□□□□□ -0.33
PTCH1-225ENST00000551845 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-225ENST00000551845 SPEF2Q9C093 1822 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 MCAMP43121 646 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-225ENST00000551845 NOGQ13253 232 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 HHIPL2Q6UWX4 724 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 TLR7Q9NYK1 1049 aaKnown RBP12.98□□□□□ -0.33
PTCH1-225ENST00000551845 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
PTCH1-225ENST00000551845 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-225ENST00000551845 PITPNM2Q9BZ72 1349 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-225ENST00000551845 IGSF3O75054 1194 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 PRDX5P30044 214 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 PRPF38BQ5VTL8 546 aaKnown RBP12.97□□□□□ -0.33
PTCH1-225ENST00000551845 TBC1D9Q6ZT07 1266 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
PTCH1-225ENST00000551845 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-225ENST00000551845 LDHCP07864 332 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 HUNKP57058 714 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms