RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 MAP3K11Q16584 847 aa28.83■■■□□ 2.21
TROAP-216ENST00000551567 CLMNQ96JQ2 1002 aa28.83■■■□□ 2.21
TROAP-216ENST00000551567 MEIS3Q99687 375 aa28.83■■■□□ 2.21
TROAP-216ENST00000551567 SPRYD7Q5W111 196 aa28.82■■■□□ 2.2
TROAP-216ENST00000551567 TCP10L2B9ZVM9 353 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 TBC1D8O95759 1140 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 TM4SF4P48230 202 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 SREBF2Q12772 1141 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 LPIN2Q92539 896 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 SLC10A4Q96EP9 437 aa28.81■■■□□ 2.2
TROAP-216ENST00000551567 LAMB1P07942 1786 aa28.8■■■□□ 2.2
TROAP-216ENST00000551567 IREB2P48200 963 aaKnown RBP28.79■■■□□ 2.2
TROAP-216ENST00000551567 CDAN1Q8IWY9 1227 aa28.79■■■□□ 2.2
TROAP-216ENST00000551567 TEKT1Q969V4 418 aa28.79■■■□□ 2.2
TROAP-216ENST00000551567 PA2G4Q9UQ80 394 aaKnown RBP28.79■■■□□ 2.2
TROAP-216ENST00000551567 HDAC5Q9UQL6 1122 aa28.79■■■□□ 2.2
TROAP-216ENST00000551567 CIAO1O76071 339 aa28.78■■■□□ 2.2
TROAP-216ENST00000551567 HDLBPQ00341 1268 aaKnown RBP28.78■■■□□ 2.2
TROAP-216ENST00000551567 ARHGAP45Q92619 1136 aa28.78■■■□□ 2.2
TROAP-216ENST00000551567 WNK4Q96J92 1243 aa28.78■■■□□ 2.2
TROAP-216ENST00000551567 USP2O75604 605 aaPredicted RBP28.77■■■□□ 2.2
TROAP-216ENST00000551567 ATP2B3Q16720 1220 aa28.77■■■□□ 2.2
TROAP-216ENST00000551567 INTS3Q68E01 1043 aaKnown RBP28.77■■■□□ 2.2
TROAP-216ENST00000551567 TMEM39BQ9GZU3 492 aa28.77■■■□□ 2.2
TROAP-216ENST00000551567 CEP126Q9P2H0 1117 aa28.77■■■□□ 2.2
TROAP-216ENST00000551567 FBXO3Q9UK99 471 aa28.77■■■□□ 2.2
TROAP-216ENST00000551567 CACNB3P54284 484 aa28.76■■■□□ 2.19
TROAP-216ENST00000551567 TEPSINQ96N21 525 aa28.76■■■□□ 2.19
TROAP-216ENST00000551567 MAST3O60307 1309 aa28.75■■■□□ 2.19
TROAP-216ENST00000551567 TNNI2P48788 182 aa28.75■■■□□ 2.19
TROAP-216ENST00000551567 TNNQ9UQP3 1299 aa28.75■■■□□ 2.19
TROAP-216ENST00000551567 BCAR3O75815 825 aa28.74■■■□□ 2.19
TROAP-216ENST00000551567 ZBTB48P10074 688 aaPredicted RBP28.74■■■□□ 2.19
TROAP-216ENST00000551567 IL15P40933 162 aaPredicted RBP28.74■■■□□ 2.19
TROAP-216ENST00000551567 CTU1Q7Z7A3 348 aaKnown RBP28.74■■■□□ 2.19
TROAP-216ENST00000551567 ZNF296Q8WUU4 475 aaPredicted RBP28.74■■■□□ 2.19
TROAP-216ENST00000551567 FRAT1Q92837 279 aaPredicted RBP28.74■■■□□ 2.19
TROAP-216ENST00000551567 SUGT1Q9Y2Z0 365 aa28.74■■■□□ 2.19
TROAP-216ENST00000551567 MANSC4A6NHS7 340 aaPredicted RBP28.73■■■□□ 2.19
TROAP-216ENST00000551567 UNCXA6NJT0 531 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 GNAI3P08754 354 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 TRIM27P14373 513 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 ANKRD13AQ8IZ07 590 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 MIER1Q8N108 512 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 WDR66Q8TBY9 1149 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 ZDHHC15Q96MV8 337 aa28.73■■■□□ 2.19
TROAP-216ENST00000551567 COPRSQ9NQ92 184 aa28.72■■■□□ 2.19
TROAP-216ENST00000551567 TMOD2Q9NZR1 351 aa28.72■■■□□ 2.19
TROAP-216ENST00000551567 GPR25O00155 361 aa28.71■■■□□ 2.19
TROAP-216ENST00000551567 IPO8O15397 1037 aaKnown RBP28.71■■■□□ 2.19
TROAP-216ENST00000551567 GJA5P36382 358 aa28.71■■■□□ 2.19
TROAP-216ENST00000551567 APOBEC3HQ6NTF7 200 aaKnown RBP28.71■■■□□ 2.19
TROAP-216ENST00000551567 R3HDMLQ9H3Y0 253 aa28.71■■■□□ 2.19
TROAP-216ENST00000551567 ELP3Q9H9T3 547 aa28.71■■■□□ 2.19
TROAP-216ENST00000551567 HNRNPUQ00839 825 aaKnown RBP eCLIP28.7■■■□□ 2.18
TROAP-216ENST00000551567 HHIPL2Q6UWX4 724 aa28.7■■■□□ 2.18
TROAP-216ENST00000551567 ATF7IPQ6VMQ6 1270 aa28.7■■■□□ 2.18
TROAP-216ENST00000551567 CLUAP1Q96AJ1 413 aa28.7■■■□□ 2.18
TROAP-216ENST00000551567 MRIQ9BWK5 157 aa28.7■■■□□ 2.18
TROAP-216ENST00000551567 GNL3LQ9NVN8 582 aaKnown RBP28.7■■■□□ 2.18
TROAP-216ENST00000551567 SRGAP3O43295 1099 aa28.69■■■□□ 2.18
TROAP-216ENST00000551567 PHKA1P46020 1223 aa28.69■■■□□ 2.18
TROAP-216ENST00000551567 IFNL1Q8IU54 200 aa28.69■■■□□ 2.18
TROAP-216ENST00000551567 IGF2BP3O00425 579 aaKnown RBP eCLIP28.68■■■□□ 2.18
TROAP-216ENST00000551567 ALDH1A1P00352 501 aa28.68■■■□□ 2.18
TROAP-216ENST00000551567 ADORA1P30542 326 aa28.68■■■□□ 2.18
TROAP-216ENST00000551567 INHBEP58166 350 aa28.68■■■□□ 2.18
TROAP-216ENST00000551567 DIEXFQ68CQ4 756 aaKnown RBP28.68■■■□□ 2.18
TROAP-216ENST00000551567 CFHR5Q9BXR6 569 aa28.68■■■□□ 2.18
TROAP-216ENST00000551567 PRDX5P30044 214 aa28.67■■■□□ 2.18
TROAP-216ENST00000551567 DIXDC1Q155Q3 683 aa28.67■■■□□ 2.18
TROAP-216ENST00000551567 NOM1Q5C9Z4 860 aaKnown RBP28.67■■■□□ 2.18
TROAP-216ENST00000551567 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.67■■■□□ 2.18
TROAP-216ENST00000551567 OPTNQ96CV9 577 aa28.67■■■□□ 2.18
TROAP-216ENST00000551567 FKTNO75072 461 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 MTX1Q13505 466 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 VGLL4Q14135 290 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 FAM83AQ86UY5 434 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.65■■■□□ 2.183e-11■□□□□ 9.2
TROAP-216ENST00000551567 CNKSR2Q8WXI2 1034 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 DENND2AQ9ULE3 1009 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 DAGLAQ9Y4D2 1042 aa28.65■■■□□ 2.18
TROAP-216ENST00000551567 LDHBP07195 334 aaKnown RBP28.64■■■□□ 2.18
TROAP-216ENST00000551567 FKBP1CQ5VVH2 108 aa28.64■■■□□ 2.18
TROAP-216ENST00000551567 CCDC102BQ68D86 513 aa28.64■■■□□ 2.18
TROAP-216ENST00000551567 CSADQ9Y600 493 aa28.64■■■□□ 2.18
TROAP-216ENST00000551567 AK9Q5TCS8 1911 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 MYH2Q9UKX2 1941 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 SEMA3EO15041 775 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 RGS19P49795 217 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 TIMM10P62072 90 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 MAP3K9P80192 1104 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 TFCP2Q12800 502 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 SALL1Q9NSC2 1324 aa28.63■■■□□ 2.17
TROAP-216ENST00000551567 GNAI2P04899 355 aa28.62■■■□□ 2.17
TROAP-216ENST00000551567 MLLT1Q03111 559 aaPredicted RBP28.62■■■□□ 2.17
TROAP-216ENST00000551567 RPAP1Q9BWH6 1393 aaPredicted RBP28.62■■■□□ 2.17
TROAP-216ENST00000551567 A0A1B0GUL7 405 aa28.61■■■□□ 2.17
TROAP-216ENST00000551567 ZKSCAN2Q63HK3 967 aa28.61■■■□□ 2.17
TROAP-216ENST00000551567 CDC42EP5Q6NZY7 148 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms