RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 FSD1Q9BTV5 496 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 MXD3Q9BW11 206 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 RFX7Q2KHR2 1363 aa14.21□□□□□ -0.14
PRPF40B-213ENST00000551269 POLR2AP24928 1970 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 SLF2Q8IX21 1173 aa14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 EVI5LQ96CN4 794 aa14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 EDC3Q96F86 508 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 TTF2Q9UNY4 1162 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-213ENST00000551269 BAZ2AQ9UIF9 1905 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 GLTPD2A6NH11 291 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 IGSF3O75054 1194 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 DDNO94850 711 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 GSTO1P78417 241 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 ZSCAN25Q6NSZ9 544 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 ANTXR1Q9H6X2 564 aa14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 PIH1D3Q9NQM4 214 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-213ENST00000551269 USP17L8P0C7I0 530 aa14.18□□□□□ -0.14
PRPF40B-213ENST00000551269 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-213ENST00000551269 DPF2Q92785 391 aa14.18□□□□□ -0.14
PRPF40B-213ENST00000551269 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-213ENST00000551269 LAMA4Q16363 1823 aa14.18□□□□□ -0.14
PRPF40B-213ENST00000551269 IQCA1LA6NCM1 817 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 H7C1D1 291 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 MMP14P50281 582 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 SCNN1DP51172 638 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 RBM5P52756 815 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 BMP2KLQ5H9B9 411 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 NAA16Q6N069 864 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 MAGEB6Q8N7X4 407 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 TEKT1Q969V4 418 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
PRPF40B-213ENST00000551269 MROH7-TTC4A0A0A0MT08 1334 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 DDX60LQ5H9U9 1706 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 LDHCP07864 332 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 ZFYP08048 801 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 MECOMQ03112 1051 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 TMED8Q6PL24 325 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 GMLQ99445 158 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 DIAPH3Q9NSV4 1193 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 HACL1Q9UJ83 578 aa14.16□□□□□ -0.14
PRPF40B-213ENST00000551269 HIP1O00291 1037 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 PDE6AP16499 860 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 SDSP20132 328 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 ADD2P35612 726 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 CRKP46108 304 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 HDLBPQ00341 1268 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 GRIK5Q16478 980 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 KIF4BQ2VIQ3 1234 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 SLC9C2Q5TAH2 1124 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 MYOZ2Q9NPC6 264 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
PRPF40B-213ENST00000551269 CYP7A1P22680 504 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 DLGAP5Q15398 846 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 DIXDC1Q155Q3 683 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 CFAP100Q494V2 611 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 CASC1Q6TDU7 716 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 ADARB2Q9NS39 739 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 TRPM7Q96QT4 1865 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 ZNF532Q9HCE3 1301 aa14.14□□□□□ -0.15
PRPF40B-213ENST00000551269 MYO1BO43795 1136 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 BAG3O95817 575 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 ZNF280AP59817 542 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 TICAM2Q86XR7 235 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 CERS3Q8IU89 383 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 APPBP2Q92624 585 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 TMOD2Q9NZR1 351 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 GAKO14976 1311 aa14.13□□□□□ -0.15
PRPF40B-213ENST00000551269 SHTN1A0MZ66 631 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 RNF113AO15541 343 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 YY1P25490 414 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 EPHX2P34913 555 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 EPS15P42566 896 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 BTDP43251 543 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 RBM26Q5T8P6 1007 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 HHIPL2Q6UWX4 724 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 ZDHHC15Q96MV8 337 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 DAGLAQ9Y4D2 1042 aa14.12□□□□□ -0.15
PRPF40B-213ENST00000551269 MAGEB6P1A0A0J9YX57 407 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 CDC45O75419 566 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 PLCG2P16885 1265 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 EAPPQ56P03 285 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 TRPM4Q8TD43 1214 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 AIDAQ96BJ3 306 aa14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 GPBP1L1Q9HC44 474 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-213ENST00000551269 AATFQ9NY61 560 aaKnown RBP eCLIP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms