RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LYSMD3Q7Z3D4 306 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 USP48Q86UV5 1035 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 TDRD7Q8NHU6 1098 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 CLP1Q92989 425 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 SMARCE1Q969G3 411 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 TSPAN10Q9H1Z9 355 aaPredicted RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 ZSCAN16Q9H4T2 348 aaPredicted RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 NUP155O75694 1391 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 ERCC6Q03468 1493 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 PPRC1Q5VV67 1664 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 ADCY10Q96PN6 1610 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 KIF24Q5T7B8 1368 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 CCDC196A0A1B0GTZ2 297 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 KIF2AO00139 706 aaPredicted RBP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 MAN1A2O60476 641 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 NEMFO60524 1076 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 LGR5O75473 907 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 WEE1P30291 646 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 TNNT3P45378 269 aaPredicted RBP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 KCNJ6P48051 423 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 ZNF75DP51815 510 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 CORO7P57737 925 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 UBE2HP62256 183 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 OCLNQ16625 522 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 C4orf17Q53FE4 359 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 SLC27A3Q5K4L6 730 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 KRBA2Q6ZNG9 492 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 MMS22LQ6ZRQ5 1243 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 EP400NLQ6ZTU2 488 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 PRICKLE2Q7Z3G6 844 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 CCDC91Q7Z6B0 441 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 SIRT2Q8IXJ6 389 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 TMEM57Q8N5G2 664 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 NEK11Q8NG66 645 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 ZDHHC1Q8WTX9 485 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 TRERF1Q96PN7 1200 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 TACO1Q9BSH4 297 aaKnown RBP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 LNPKQ9C0E8 428 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 RBM28Q9NW13 759 aaKnown RBP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 CWC15Q9P013 229 aaKnown RBP6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 USTQ9Y2C2 406 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 C9orf84Q5VXU9 1444 aa6.24□□□□□ -1.41
LSM3P2-201ENST00000551246 MSH6P52701 1360 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 PPP1R12AO14974 1030 aaPredicted RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 SGSM2O43147 1006 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 EPB41L2O43491 1005 aaKnown RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 RHOQP17081 205 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ACTN2P35609 894 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ST5P78524 1137 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 MAP2K1Q02750 393 aaPredicted RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 POU4F2Q12837 409 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ELF2Q15723 593 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ALDH1L2Q3SY69 923 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TTC31Q49AM3 519 aaPredicted RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TEX35Q5T0J7 233 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TTC22Q5TAA0 569 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 NBPF10Q6P3W6 841 aaKnown RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 SARM1Q6SZW1 724 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 CCDC186Q7Z3E2 898 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TICAM2Q86XR7 235 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TCP11L2Q8N4U5 519 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 NBPF15Q8N660 670 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 CCDC191Q8NCU4 936 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 RHBDD1Q8TEB9 315 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 CACTINQ8WUQ7 758 aaKnown RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 STAG1Q8WVM7 1258 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 SSH1Q8WYL5 1049 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ARHGAP45Q92619 1136 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TMX3Q96JJ7 454 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 EXOC6BQ9Y2D4 811 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 LRRFIP2Q9Y608 721 aaKnown RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 TROQ12816 1431 aaPredicted RBP6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 IQGAP2Q13576 1575 aa6.23□□□□□ -1.41
LSM3P2-201ENST00000551246 ZNF518AQ6AHZ1 1483 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 ABCC11Q96J66 1382 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 KLHL33A6NCF5 533 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 TBC1D8O95759 1140 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 IVLP07476 585 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 CSB-PGBD3P0DP91 1061 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 ANAPC15P60006 121 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 LRMPQ12912 555 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 WDR44Q5JSH3 913 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 SH3PXD2AQ5TCZ1 1133 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 TAS1R3Q7RTX0 852 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 C10orf67Q8IYJ2 551 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 GOLGA6L1Q8N7Z2 621 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 TBC1D22AQ8WUA7 517 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 SGSM3Q96HU1 749 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 SUFUQ9UMX1 484 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 PTCH1Q13635 1447 aa6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 WDR33Q9C0J8 1336 aaKnown RBP6.22□□□□□ -1.41
LSM3P2-201ENST00000551246 DUOX2Q9NRD8 1548 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 SLC35F4A4IF30 521 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 EML1O00423 815 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms