RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SNX27Q96L92 541 aa14.8□□□□□ -0.04
GPN3-208ENST00000550974 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
GPN3-208ENST00000550974 C11orf49Q9H6J7 331 aa14.8□□□□□ -0.04
GPN3-208ENST00000550974 TSPYL4Q9UJ04 414 aa14.8□□□□□ -0.04
GPN3-208ENST00000550974 PDHXO00330 501 aa14.79□□□□□ -0.04
GPN3-208ENST00000550974 FLT3LGP49771 235 aa14.79□□□□□ -0.04
GPN3-208ENST00000550974 CCT4P50991 539 aaKnown RBP14.79□□□□□ -0.04
GPN3-208ENST00000550974 RBM5P52756 815 aaKnown RBP eCLIP14.79□□□□□ -0.04
GPN3-208ENST00000550974 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
GPN3-208ENST00000550974 ANKLE1Q8NAG6 615 aa14.79□□□□□ -0.04
GPN3-208ENST00000550974 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
GPN3-208ENST00000550974 SYNGAP1Q96PV0 1343 aa14.78□□□□□ -0.04
GPN3-208ENST00000550974 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
GPN3-208ENST00000550974 CERS5Q8N5B7 392 aa14.78□□□□□ -0.04
GPN3-208ENST00000550974 PXYLP1Q8TE99 480 aa14.78□□□□□ -0.04
GPN3-208ENST00000550974 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.78□□□□□ -0.04
GPN3-208ENST00000550974 MINPP1Q9UNW1 487 aa14.78□□□□□ -0.04
GPN3-208ENST00000550974 COL2A1P02458 1487 aaPredicted RBP14.77□□□□□ -0.04
GPN3-208ENST00000550974 KLRK1P26718 216 aa14.77□□□□□ -0.05
GPN3-208ENST00000550974 TNFAIP1Q13829 316 aa14.77□□□□□ -0.05
GPN3-208ENST00000550974 ZBTB38Q8NAP3 1195 aaPredicted RBP14.77□□□□□ -0.05
GPN3-208ENST00000550974 SNCAIPQ9Y6H5 919 aa14.77□□□□□ -0.05
GPN3-208ENST00000550974 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
GPN3-208ENST00000550974 HSP90B1P14625 803 aaKnown RBP14.76□□□□□ -0.05
GPN3-208ENST00000550974 ANKRD23Q86SG2 305 aa14.76□□□□□ -0.05
GPN3-208ENST00000550974 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
GPN3-208ENST00000550974 TEPSINQ96N21 525 aa14.76□□□□□ -0.05
GPN3-208ENST00000550974 PDE8AO60658 829 aa14.75□□□□□ -0.05
GPN3-208ENST00000550974 PPIL2Q13356 520 aa14.75□□□□□ -0.05
GPN3-208ENST00000550974 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
GPN3-208ENST00000550974 ZKSCAN4Q969J2 545 aaPredicted RBP14.75□□□□□ -0.05
GPN3-208ENST00000550974 CDC5LQ99459 802 aaKnown RBP14.75□□□□□ -0.05
GPN3-208ENST00000550974 TMEM39BQ9GZU3 492 aa14.75□□□□□ -0.05
GPN3-208ENST00000550974 PRUNE2Q8WUY3 3088 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 ECM29Q5VYK3 1845 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 TCP10L2B9ZVM9 353 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 LBHD1Q9BQE6 289 aaPredicted RBP14.74□□□□□ -0.05
GPN3-208ENST00000550974 TTYH1Q9H313 450 aaPredicted RBP14.74□□□□□ -0.05
GPN3-208ENST00000550974 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
GPN3-208ENST00000550974 CHPF2Q9P2E5 772 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 ZNF70Q9UC06 446 aaPredicted RBP14.74□□□□□ -0.05
GPN3-208ENST00000550974 LEMD3Q9Y2U8 911 aa14.74□□□□□ -0.05
GPN3-208ENST00000550974 TNPO2O14787 897 aaKnown RBP14.73□□□□□ -0.05
GPN3-208ENST00000550974 NEFMP07197 916 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 CYP2C8P10632 490 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 BCRP11274 1271 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
GPN3-208ENST00000550974 IRF5Q13568 498 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 WRNIP1Q96S55 665 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 CD209Q9NNX6 404 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 BSDC1Q9NW68 430 aaPredicted RBP14.73□□□□□ -0.05
GPN3-208ENST00000550974 HCN4Q9Y3Q4 1203 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 TTC28Q96AY4 2481 aa14.73□□□□□ -0.05
GPN3-208ENST00000550974 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
GPN3-208ENST00000550974 ALYREFQ86V81 257 aaKnown RBP14.72□□□□□ -0.05
GPN3-208ENST00000550974 PARK7Q99497 189 aaKnown RBP14.72□□□□□ -0.05
GPN3-208ENST00000550974 PFASO15067 1338 aa14.71□□□□□ -0.05
GPN3-208ENST00000550974 ADAMTS19Q8TE59 1207 aa14.71□□□□□ -0.05
GPN3-208ENST00000550974 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
GPN3-208ENST00000550974 JAG2Q9Y219 1238 aa14.71□□□□□ -0.05
GPN3-208ENST00000550974 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
GPN3-208ENST00000550974 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
GPN3-208ENST00000550974 TNNI2P48788 182 aa14.7□□□□□ -0.06
GPN3-208ENST00000550974 PPATQ06203 517 aa14.7□□□□□ -0.06
GPN3-208ENST00000550974 UHRF1Q96T88 793 aaPredicted RBP14.7□□□□□ -0.06
GPN3-208ENST00000550974 HMX1Q9NP08 348 aaPredicted RBP14.7□□□□□ -0.06
GPN3-208ENST00000550974 KCNJ4P48050 445 aa14.69□□□□□ -0.06
GPN3-208ENST00000550974 LRRC26Q2I0M4 334 aa14.69□□□□□ -0.06
GPN3-208ENST00000550974 MGAMO43451 1857 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 PCCAP05165 728 aaPredicted RBP14.68□□□□□ -0.06
GPN3-208ENST00000550974 SHHQ15465 462 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 RIC3Q7Z5B4 369 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 ASB2Q96Q27 587 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 OGDHLQ9ULD0 1010 aa14.68□□□□□ -0.06
GPN3-208ENST00000550974 DLG5Q8TDM6 1919 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 CTSWP56202 376 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 TRIM32Q13049 653 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 MOGSQ13724 837 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
GPN3-208ENST00000550974 PPM1EQ8WY54 764 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 MYD88Q99836 296 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 GREM2Q9H772 168 aa14.67□□□□□ -0.06
GPN3-208ENST00000550974 HMGCRP04035 888 aa14.66□□□□□ -0.06
GPN3-208ENST00000550974 FKBP1AP62942 108 aaKnown RBP14.66□□□□□ -0.06
GPN3-208ENST00000550974 COA7Q96BR5 231 aa14.66□□□□□ -0.06
GPN3-208ENST00000550974 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
GPN3-208ENST00000550974 CDH23Q9H251 3354 aa14.66□□□□□ -0.06
GPN3-208ENST00000550974 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
GPN3-208ENST00000550974 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
GPN3-208ENST00000550974 C9orf50Q5SZB4 431 aa14.65□□□□□ -0.06
GPN3-208ENST00000550974 HDGFL1Q5TGJ6 251 aa14.65□□□□□ -0.06
GPN3-208ENST00000550974 GPAT2Q6NUI2 795 aa14.65□□□□□ -0.06
GPN3-208ENST00000550974 DZIP1LQ8IYY4 767 aaKnown RBP14.65□□□□□ -0.06
GPN3-208ENST00000550974 IL27Q8NEV9 243 aa14.65□□□□□ -0.06
GPN3-208ENST00000550974 TTLL11Q8NHH1 800 aa14.65□□□□□ -0.06
GPN3-208ENST00000550974 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
GPN3-208ENST00000550974 KCNH4Q9UQ05 1017 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms