RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 JAK2O60674 1132 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.51
SCN8A-206ENST00000550891 FAM84BQ96KN1 310 aaPredicted RBP18.27■□□□□ 0.51
SCN8A-206ENST00000550891 AGXT2Q9BYV1 514 aa18.27■□□□□ 0.51
SCN8A-206ENST00000550891 TOMM22Q9NS69 142 aa18.27■□□□□ 0.51
SCN8A-206ENST00000550891 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
SCN8A-206ENST00000550891 GPT2Q8TD30 523 aa18.26■□□□□ 0.51
SCN8A-206ENST00000550891 CPLX1O14810 134 aa18.26■□□□□ 0.51
SCN8A-206ENST00000550891 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
SCN8A-206ENST00000550891 KRT85P78386 507 aa18.26■□□□□ 0.51
SCN8A-206ENST00000550891 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 GRAPQ13588 217 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 ALX1Q15699 326 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 CDC37L1Q7L3B6 337 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 KLF18A0A0U1RQI7 1052 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 CHAF1AQ13111 956 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 GOLGA8BA8MQT2 603 aa18.25■□□□□ 0.51
SCN8A-206ENST00000550891 PDIA3P30101 505 aaKnown RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 NAA16Q6N069 864 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-206ENST00000550891 TAF1LQ8IZX4 1826 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 SERPINB2P05120 415 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 GYS1P13807 737 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 TXNRD1Q16881 649 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 ZSCAN23Q3MJ62 389 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
SCN8A-206ENST00000550891 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 LCORLQ8N3X6 602 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 CNNM2Q9H8M5 875 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 NCOA5Q9HCD5 579 aaKnown RBP18.24■□□□□ 0.51
SCN8A-206ENST00000550891 PNPLA7Q6ZV29 1317 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 FBXL16Q8N461 479 aa18.24■□□□□ 0.51
SCN8A-206ENST00000550891 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 MFSD6Q6ZSS7 791 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 FBXO33Q7Z6M2 555 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 TBC1D10CQ8IV04 446 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
SCN8A-206ENST00000550891 ZMYM6O95789 1325 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 B4E1Z4 1266 aa18.23■□□□□ 0.51
SCN8A-206ENST00000550891 NSUN7Q8NE18 718 aaKnown RBP18.23■□□□□ 0.51
SCN8A-206ENST00000550891 ANP32BQ92688 251 aaKnown RBP18.23■□□□□ 0.51
SCN8A-206ENST00000550891 UBE2HP62256 183 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 RRP12Q5JTH9 1297 aaKnown RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 KRT23Q9C075 422 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 GOLGA6L4A6NEF3 574 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 TM4SF1P30408 202 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 FOSBP53539 338 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 SMARCC2Q8TAQ2 1214 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 GPHNQ9NQX3 736 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-206ENST00000550891 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
SCN8A-206ENST00000550891 TAF1P21675 1872 aa18.21■□□□□ 0.51
SCN8A-206ENST00000550891 PRKAB2O43741 272 aa18.21■□□□□ 0.51
SCN8A-206ENST00000550891 RBM17Q96I25 401 aaKnown RBP18.21■□□□□ 0.51
SCN8A-206ENST00000550891 TMEM87BQ96K49 555 aa18.21■□□□□ 0.51
SCN8A-206ENST00000550891 EPB41L4AQ9HCS5 686 aaPredicted RBP18.21■□□□□ 0.51
SCN8A-206ENST00000550891 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCN8A-206ENST00000550891 KLRK1P26718 216 aa18.21■□□□□ 0.51
SCN8A-206ENST00000550891 XDHP47989 1333 aa18.21■□□□□ 0.51
SCN8A-206ENST00000550891 ERICH2A1L162 156 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 ZNF445P59923 1031 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 CTDSPL2Q05D32 466 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 ZSCAN16Q9H4T2 348 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 MINDY4BA8MYZ0 360 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 APBA3O96018 575 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 SCAND2PQ9GZW5 306 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 COL4A1P02462 1669 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 MYO5AQ9Y4I1 1855 aaKnown RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 EVCP57679 992 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 ANTXR2P58335 489 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 TMEM67Q5HYA8 995 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
SCN8A-206ENST00000550891 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
SCN8A-206ENST00000550891 DZIP1Q86YF9 867 aaKnown RBP18.19■□□□□ 0.5
SCN8A-206ENST00000550891 STK11IPQ8N1F8 1099 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
SCN8A-206ENST00000550891 KDM4AO75164 1064 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
SCN8A-206ENST00000550891 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms